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CAZyme Information: MGYG000000091_00027

You are here: Home > Sequence: MGYG000000091_00027

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Achromobacter xylosoxidans
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Achromobacter; Achromobacter xylosoxidans
CAZyme ID MGYG000000091_00027
CAZy Family GT9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
325 MGYG000000091_1|CGC1 36295.82 9.4151
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000091 6684283 Isolate United Kingdom Europe
Gene Location Start: 26324;  End: 27301  Strand: +

Full Sequence      Download help

MAQPAPNMPP  YDASASVRGL  RDAKRVALLM  APRLGDTLLM  MTMAHNLIAH  GRDVTIFGDY60
AYGLRDWFPG  MDIRPSLPEE  QAAAVLKDYD  CAAQMHVGWP  YALHAFAPSY  FYYDAHVVIT120
GRGFVKLNQI  RDYCRDQLGL  ALADTDIGLR  PPVAGRHRIF  EKRVAVHPSS  TGPDRCWAPR180
HFVELGLRLQ  RQGYEPVFIL  APHERADWAC  LTEAGLAIQQ  SPALVDVAAF  IHECGWFIGN240
ESGVGHLASS  VGVPTLTLTG  RPTRTKAWRP  GWSMSRIAYP  AYIPGGRWRD  RLWREWLRPG300
SVMAAFEGLT  RDYKKSIMAS  KVARP325

Enzyme Prediction      help

No EC number prediction in MGYG000000091_00027.

CAZyme Signature Domains help

Created with Snap163248658197113130146162178195211227243260276292308136270GT9
Family Start End Evalue family coverage
GT9 136 270 2.8e-25 0.5911111111111111

CDD Domains      download full data without filtering help

Created with Snap163248658197113130146162178195211227243260276292308140270GT9_LPS_heptosyltransferase96286RfaF92270Glyco_transf_9161273PRK10422
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03789 GT9_LPS_heptosyltransferase 7.98e-17 140 270 97 232
lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
COG0859 RfaF 5.93e-16 96 286 113 309
ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis].
pfam01075 Glyco_transf_9 2.03e-12 92 270 33 222
Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.
PRK10422 PRK10422 7.77e-07 161 273 183 300
lipopolysaccharide core biosynthesis protein; Provisional

CAZyme Hits      help

Created with Snap1632486581971131301461621781952112272432602762923081324QKI71615.1|GT01324SQG70794.1|GT01324QEQ21882.1|GT01324CKG98816.1|GT01324AXA75997.1|GT0
Hit ID E-Value Query Start Query End Hit Start Hit End
QKI71615.1 3.77e-247 1 324 1 324
SQG70794.1 1.53e-246 1 324 1 324
QEQ21882.1 1.53e-246 1 324 1 324
CKG98816.1 1.53e-246 1 324 1 324
AXA75997.1 1.53e-246 1 324 1 324

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000031 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000091_00027.