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CAZyme Information: MGYG000003585_00555
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Acidaminococcus sp900770265 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_C; Negativicutes; Acidaminococcales; Acidaminococcaceae; Acidaminococcus; Acidaminococcus sp900770265 | |||||||||||
| CAZyme ID | MGYG000003585_00555 | |||||||||||
| CAZy Family | GT9 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 7113; End: 8147 Strand: - | |||||||||||
Full Sequence Download help
| MHMGDMIMTA SVMPVLRKHC PDAHITYLCS ANLAFVANLL EGLDEVIPYS YHSKGGYMDV | 60 |
| YRLGKKLEKR HFDLGISLDP RERVTLMKWF AHIPERISLE QALGWKLGWE RLFYTRDLAL | 120 |
| PKGWSYQDHS MAASFQQLMR EFFNDPATDF DPVRLKPAPA EDQEWAAQLL QKQQPRGKKI | 180 |
| ALCVQTTSRT KDWPVEKFSA ICDWLVETYD ATLFLTGIPS HEERGEAILQ GMKHREKMVD | 240 |
| LIGVTTFTQL VGLLEKMDLL LTLDTGTAHV AAAAGCPVVT IFTFNSPVIY RAPGRFCEGV | 300 |
| SGNLACSGKH ICIGPSRCPK NDCVDVVTVP MVQAAIQKIF QENS | 344 |
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT9 | 62 | 323 | 7.3e-38 | 0.9466666666666667 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd03789 | GT9_LPS_heptosyltransferase | 1.10e-43 | 2 | 336 | 9 | 275 | lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| COG0859 | RfaF | 1.97e-40 | 3 | 327 | 12 | 322 | ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis]. |
| pfam01075 | Glyco_transf_9 | 3.46e-25 | 60 | 307 | 1 | 234 | Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core. |
| PRK10422 | PRK10422 | 8.60e-11 | 4 | 282 | 17 | 288 | lipopolysaccharide core biosynthesis protein; Provisional |
| PRK10916 | PRK10916 | 7.74e-10 | 4 | 287 | 12 | 292 | ADP-heptose--LPS heptosyltransferase RfaF. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXB82130.1 | 3.50e-146 | 1 | 341 | 12 | 352 |
| AEQ21322.1 | 1.18e-129 | 1 | 341 | 21 | 361 |
| AOH48991.1 | 2.06e-32 | 2 | 323 | 3 | 311 |
| QDT20779.1 | 1.76e-30 | 3 | 344 | 26 | 358 |
| QDU02893.1 | 1.76e-30 | 3 | 344 | 26 | 358 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3TOV_A | 1.31e-14 | 2 | 290 | 18 | 295 | Thecrystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008],3TOV_B The crystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P45042 | 1.19e-10 | 4 | 287 | 12 | 292 | ADP-heptose--LPS heptosyltransferase 2 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rfaF PE=3 SV=1 |
| Q57336 | 3.86e-10 | 4 | 288 | 20 | 287 | Lipopolysaccharide core heptosyltransferase OpsX OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=opsX PE=3 SV=1 |
| P25742 | 1.23e-09 | 4 | 291 | 5 | 285 | Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli (strain K12) OX=83333 GN=rfaQ PE=3 SV=2 |
| Q9R9D5 | 4.05e-07 | 4 | 291 | 5 | 285 | Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli OX=562 GN=rfaQ PE=1 SV=1 |
| P37692 | 4.16e-07 | 4 | 287 | 12 | 292 | ADP-heptose--LPS heptosyltransferase 2 OS=Escherichia coli (strain K12) OX=83333 GN=rfaF PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000042 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |