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CAZyme Information: MGYG000004454_00228

You are here: Home > Sequence: MGYG000004454_00228

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sutterella faecalis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Sutterella; Sutterella faecalis
CAZyme ID MGYG000004454_00228
CAZy Family GT9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
311 MGYG000004454_2|CGC1 33811.4 9.0293
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004454 2664480 MAG Israel Asia
Gene Location Start: 13930;  End: 14865  Strand: +

Full Sequence      Download help

MTQILCRLPN  HVGDCCMALP  GLRLLEASGL  TPVLTGKRWA  EDLLAGTGWR  FEPIEGHVTE60
DFSRIRNIAR  HFGTAPKGLL  FPNSLSSALL  YALGGIKSAG  YPTDWRRLFL  DKSVPEPGKM120
HEVERFFTLA  HGALEAWDIK  PAWDKVPPSL  GLTPLKRHEA  GARNLMQELK  IPENFALLAP180
IARGLHHGKK  KHWEHFNALC  TPLRDLGIEP  VVFPSVREAD  LARAACPDAM  ICPPTTLGTL240
AALAKRSRMV  IANDSGLSHV  AAAVGAPQIT  LIGVTDPSRT  APWNPRAIVL  GKEGAWPTLE300
EVLAAIKKLA  S311

Enzyme Prediction      help

No EC number prediction in MGYG000004454_00228.

CAZyme Signature Domains help

Created with Snap15314662779310812413915517118620221723324826427929581292GT9
Family Start End Evalue family coverage
GT9 81 292 4.4e-33 0.8266666666666667

CDD Domains      download full data without filtering help

Created with Snap15314662779310812413915517118620221723324826427929578302Glyco_transf_94285RfaF4297GT9_LPS_heptosyltransferase4287heptsyl_trn_II105288PRK10422
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01075 Glyco_transf_9 5.05e-34 78 302 16 240
Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.
COG0859 RfaF 2.29e-24 4 285 4 290
ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis].
cd03789 GT9_LPS_heptosyltransferase 1.02e-22 4 297 2 247
lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
TIGR02195 heptsyl_trn_II 1.56e-15 4 287 2 292
lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK10422 PRK10422 4.43e-09 105 288 125 304
lipopolysaccharide core biosynthesis protein; Provisional

CAZyme Hits      help

Created with Snap1531466277931081241391551711862022172332482642792951311QDA55160.1|GT94311QQS89241.1|GT92309BBF22597.1|GT91311ANU65198.1|GT91311QQQ96353.1|GT9
Hit ID E-Value Query Start Query End Hit Start Hit End
QDA55160.1 6.65e-234 1 311 1 311
QQS89241.1 2.83e-186 4 311 6 314
BBF22597.1 4.34e-145 2 309 3 310
ANU65198.1 1.80e-118 1 311 1 310
QQQ96353.1 1.80e-118 1 311 1 310

PDB Hits      download full data without filtering help

Created with Snap15314662779310812413915517118620221723324826427929592901PSW_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1PSW_A 1.92e-07 9 290 8 305
Structureof E. coli ADP-heptose lps heptosyltransferase II [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Created with Snap15314662779310812413915517118620221723324826427929579290sp|P45042|RFAF_HAEIN9290sp|P37692|RFAF_ECOLI9290sp|P37421|RFAF_SALTY
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P45042 9.86e-09 79 290 84 305
ADP-heptose--LPS heptosyltransferase 2 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rfaF PE=3 SV=1
P37692 1.03e-07 9 290 8 305
ADP-heptose--LPS heptosyltransferase 2 OS=Escherichia coli (strain K12) OX=83333 GN=rfaF PE=1 SV=1
P37421 4.40e-07 9 290 8 305
ADP-heptose--LPS heptosyltransferase 2 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004454_00228.