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CAZyme Information: MGYG000004694_00799
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Sutterella sp900754475 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Sutterella; Sutterella sp900754475 | |||||||||||
| CAZyme ID | MGYG000004694_00799 | |||||||||||
| CAZy Family | GT9 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 38039; End: 38977 Strand: + | |||||||||||
Full Sequence Download help
| MSTKVLCRLP NHVGDCCMAL PALRLLEASG FTPVLTGKRW AEDLFAGMGW RFDPIEGHVT | 60 |
| EDFRRIRRLA DLAGGSPLGL LFPNSFSSAL LFRIGGIRSA GLATDGRSFL LDKAIPEPSK | 120 |
| MHEVERFFHT TAEAVKAWGK TPAWEKAPEE LGLRVLSRHK AAAHNLIEKF GIPERFALIA | 180 |
| PIARGTHHGQ NKCWPHFDEL CVYLKSRDVA PIIFPSPHEI EEAKAACPNG IVLEPTTLGN | 240 |
| YAALAQLARV VVANDSGISH IAAAVSAPQI TVVGVTDLER TAPWNTRAAV CGEMGRWPTL | 300 |
| DEVRSRLNAL ID | 312 |
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT9 | 80 | 290 | 4.5e-29 | 0.8222222222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam01075 | Glyco_transf_9 | 1.62e-29 | 78 | 292 | 15 | 228 | Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core. |
| COG0859 | RfaF | 4.13e-23 | 4 | 283 | 3 | 287 | ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis]. |
| cd03789 | GT9_LPS_heptosyltransferase | 1.72e-20 | 4 | 290 | 1 | 239 | lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| TIGR02195 | heptsyl_trn_II | 2.99e-14 | 4 | 290 | 1 | 294 | lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK10422 | PRK10422 | 5.06e-06 | 170 | 302 | 179 | 319 | lipopolysaccharide core biosynthesis protein; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBF22597.1 | 2.70e-229 | 1 | 312 | 1 | 312 |
| QDA55160.1 | 8.77e-145 | 3 | 310 | 2 | 309 |
| QQS89241.1 | 1.63e-141 | 5 | 312 | 6 | 314 |
| ANU65198.1 | 8.72e-117 | 3 | 311 | 2 | 309 |
| QQQ96353.1 | 8.72e-117 | 3 | 311 | 2 | 309 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P37421 | 3.38e-06 | 4 | 290 | 2 | 304 | ADP-heptose--LPS heptosyltransferase 2 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaF PE=3 SV=1 |
| P37692 | 4.51e-06 | 4 | 290 | 2 | 304 | ADP-heptose--LPS heptosyltransferase 2 OS=Escherichia coli (strain K12) OX=83333 GN=rfaF PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000046 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |