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CAZyme Information: MGYG000004838_00439

You are here: Home > Sequence: MGYG000004838_00439

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG023 sp900315435
Lineage Bacteria; Spirochaetota; Spirochaetia; Sphaerochaetales; Sphaerochaetaceae; RUG023; RUG023 sp900315435
CAZyme ID MGYG000004838_00439
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
441 47935.92 5.3136
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004838 1853088 MAG China Asia
Gene Location Start: 1823;  End: 3148  Strand: -

Full Sequence      Download help

MRKVLAVLAA  CAVGAAVYAQ  PTREVRLDER  HPSLELVGYG  SDTKGGMGGA  VIKVTNLHAD60
GDGSFKAALE  AEGPRIIVFE  VGGVIDLEKQ  QIKVKNPYVT  IAGQTAPSPG  ITCIRGGLTL120
DTHDIVMQHI  RFRMGDAGAE  PGSGYEPEIS  TSAHANAYNI  VIDHCSVSWG  VDENLSVSGT180
RGGNGTKSPH  DVTLSYNFIS  EGLRYSVHSK  TKSKHMDHSM  GTLVMDDVKR  VAVIGNYFAH240
NSERNPWYKA  NSSGVVVNNL  IYDPGTWAIR  LSWIPKEWKN  VKDEKPGTPV  VSIVGNYEKE300
GPSTKVAAMV  GSNYPENHES  GYLEDNICVR  ADGTQGKVTD  PSIPIDQLEQ  RPIWIEGLDV360
IPANEVPDYI  LKWAGARPAD  RDETDLRLID  EFSKGTGRII  DSQDEVGGYP  VAAPTYRKLD420
VPDEHIGQWL  EGFTEAVMGL  R441

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Created with Snap2244668811013215417619822024226428630833035237439641882269PL1
Family Start End Evalue family coverage
PL1 82 269 7.7e-50 0.907103825136612

CDD Domains      help

MGYG000004838_00439 has no CDD domain.

CAZyme Hits      help

Created with Snap2244668811013215417619822024226428630833035237439641837434QYK69250.1|PL1_237434ALA44843.1|PL1_237434ALP35378.1|PL1_237434APB74413.1|PL1_237434AIW40090.1|PL1_2
Hit ID E-Value Query Start Query End Hit Start Hit End
QYK69250.1 1.81e-146 37 434 43 430
ALA44843.1 3.35e-146 37 434 20 407
ALP35378.1 7.30e-146 37 434 43 430
APB74413.1 7.30e-146 37 434 43 430
AIW40090.1 7.30e-146 37 434 43 430

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap2244668811013215417619822024226428630833035237439641838408sp|Q5B297|PLYC_EMENI38408sp|B8NQQ7|PLYC_ASPFN38408sp|A1DPF0|PLYC_NEOFI38408sp|Q2UB83|PLYC_ASPOR38408sp|Q0CLG7|PLYC_ASPTN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 3.41e-34 38 408 28 356
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B8NQQ7 2.13e-32 38 408 28 360
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
A1DPF0 2.77e-31 38 408 29 361
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q2UB83 3.74e-31 38 408 28 360
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 1.83e-30 38 408 28 360
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000324 0.998875 0.000211 0.000199 0.000204 0.000171

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004838_00439.