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CAZyme Information: MGYG000004865_00263

You are here: Home > Sequence: MGYG000004865_00263

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Spirochaetota; Spirochaetia; Sphaerochaetales; Sphaerochaetaceae; RUG023;
CAZyme ID MGYG000004865_00263
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
441 MGYG000004865_5|CGC1 47947.16 5.5832
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004865 2913052 MAG China Asia
Gene Location Start: 4427;  End: 5752  Strand: -

Full Sequence      Download help

MRKALAILVL  CAVGAALHGQ  PTQEVRLDEK  HPSLELVGYG  SDTKGGMGGT  IIKVTNLHAD60
GEGSFKAALE  AEGPRIIVFE  VGGIIDLEKQ  QIKVKNPYVT  IAGQTAPSPG  ITCIRGGLTL120
DTHDIVMQHI  RFRMGDAGAE  PGSGYEPEIS  TSAHATAYNI  VVDHCSVSWG  IDENLSVSGT180
RGGDGAKSPH  DVTLSYNFIS  ECLRYSVHSK  TKSKHMDHSM  GTLVMDDVKR  VAIIGNYYAH240
NSERNPWFKA  NSSGVVVNNL  IYDPGTWAIR  LSWIPKEWKN  VKDGKPGTPV  VSIVGNYEKE300
GPSTKVVAMV  GSNYPENHES  GYLEDNICVK  ADGSQGKVTD  PSIPIGQLDQ  RPIWIDGLKV360
LPAKEVPDYI  LKWAGARPAD  RDQTDLRLID  EFTKGTGKII  DSQDEVGGYP  TATPTYRKLD420
VPDEHVEEWL  EGFTKEVMGL  D441

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Created with Snap2244668811013215417619822024226428630833035237439641882269PL1
Family Start End Evalue family coverage
PL1 82 269 2.3e-49 0.907103825136612

CDD Domains      download full data without filtering help

Created with Snap2244668811013215417619822024226428630833035237439641843246PelB
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.17e-06 43 246 48 234
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap2244668811013215417619822024226428630833035237439641837437QYK69250.1|PL1_237437ALA44843.1|PL1_237437APB74413.1|PL1_237437AIW40090.1|PL1_27437ALP35378.1|PL1_2
Hit ID E-Value Query Start Query End Hit Start Hit End
QYK69250.1 6.84e-149 37 437 43 433
ALA44843.1 1.26e-148 37 437 20 410
APB74413.1 2.76e-148 37 437 43 433
AIW40090.1 2.76e-148 37 437 43 433
ALP35378.1 7.85e-148 7 437 19 433

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap224466881101321541761982202422642863083303523743964185424sp|Q5B297|PLYC_EMENI38441sp|B8NQQ7|PLYC_ASPFN38441sp|Q2UB83|PLYC_ASPOR38408sp|A1DPF0|PLYC_NEOFI38408sp|Q0CLG7|PLYC_ASPTN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 1.16e-32 5 424 8 377
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B8NQQ7 2.93e-32 38 441 28 399
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 5.14e-31 38 441 28 399
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 1.86e-30 38 408 29 361
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q0CLG7 3.14e-29 38 408 28 360
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000272 0.999036 0.000200 0.000166 0.000172 0.000148

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004865_00263.