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CAZyme Information: MGYG000000158_00015

You are here: Home > Sequence: MGYG000000158_00015

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003436275
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003436275
CAZyme ID MGYG000000158_00015
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
535 MGYG000000158_1|CGC1 61059.04 6.4984
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000158 2308547 Isolate China Asia
Gene Location Start: 16568;  End: 18175  Strand: -

Full Sequence      Download help

MKLPSIQKAL  LYARTIRRMK  PSMIGSRLKV  LHKVPLTVPP  RIQYLSLAIP  SLDCDEIYAG60
RFDVDSLARN  EFFLINERHK  VDLSCWSVPE  ASHLWNFNLH  YFEFCIPLAA  RYALGGDRED120
ADQFKRLVLT  WIATCKYPLG  DAWHPYTISL  RLVNWLICID  LFGDALAEDS  IFMETVFESM180
YHQYRHLLAN  QEKHLLANHY  FENLKTIIIC  ALMFGENDVL  STVERDYIKQ  LDEQILPDGV240
HFERSMMYHK  LILEGLLRVE  LAYRSIGKSA  PTKVATKVKQ  MLDAMASIER  GMGKTPFFND300
AADGVAKECE  PLIHACRNIY  GYEPDYNKTA  FPDSGFYKFY  DDTAALVFFA  GEPCPSYMLG360
HAHCDLLSFE  LSLDGRPAIV  NSGTYAYQSE  LRPFFRSTAA  HNTATIDGDE  QMELWAEHRV420
ARGVSDVCVE  ENNGHCIVAS  FRNFKGHLHR  RRVELRDGQL  TVKDSTDRPN  AEVIQRFHLL480
LPNSFAIKAC  NSCLKSTYKS  IYSAGFGLQC  PITEVDLAEP  KETGVIIAFE  RRDVE535

Enzyme Prediction      help

No EC number prediction in MGYG000000158_00015.

CAZyme Signature Domains help

Created with Snap265380107133160187214240267294321347374401428454481508334464PL12
Family Start End Evalue family coverage
PL12 334 464 2.8e-25 0.9855072463768116

CDD Domains      download full data without filtering help

Created with Snap265380107133160187214240267294321347374401428454481508330479Hepar_II_III10479COG536086301Hepar_II_III_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 2.10e-39 330 479 8 164
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
COG5360 COG5360 1.69e-21 10 479 14 492
Uncharacterized conserved protein, heparinase superfamily [Function unknown].
pfam16889 Hepar_II_III_N 1.38e-07 86 301 88 317
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Created with Snap26538010713316018721424026729432134737440142845448150812427QUO20838.1|PL011484QNU66806.1|PL015464BAK43911.1|PL06486BCS56822.1|PL1240464BCA89078.1|PL0
Hit ID E-Value Query Start Query End Hit Start Hit End
QUO20838.1 3.36e-115 12 427 8 427
QNU66806.1 1.63e-108 11 484 7 500
BAK43911.1 1.54e-106 15 464 13 477
BCS56822.1 3.08e-92 6 486 4 498
BCA89078.1 4.57e-87 40 464 3 435

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap26538010713316018721424026729432134737440142845448150850453sp|C7EXL6|HEPC_BACSE
Hit ID E-Value Query Start Query End Hit Start Hit End Description
C7EXL6 4.04e-11 50 453 72 521
Heparin-sulfate lyase OS=Bacteroides stercoris OX=46506 GN=hepC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000158_00015.