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CAZyme Information: MGYG000000677_00400

You are here: Home > Sequence: MGYG000000677_00400

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Spirochaetota; Spirochaetia; Sphaerochaetales; Sphaerochaetaceae; UBA5920;
CAZyme ID MGYG000000677_00400
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
663 MGYG000000677_13|CGC1 76987.15 5.5071
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000677 2015211 MAG Kazakhstan Asia
Gene Location Start: 12429;  End: 14420  Strand: -

Full Sequence      Download help

MNYTKQLIEL  LDKENPALSE  MGEITGEKLV  EYFRNRTKPV  YLFSLKDAEE  LKDDQIIDDA60
EKVMEHDIFG  HKFNGPIDWT  FNPTTETSRD  NEWSWSLFRT  IYWQPLARAY  ALTKDERYTK120
EFLSEMHSFR  QAWPADEFIR  DFTFVPKQPF  PGTAWRTIET  GIRVYTTWLP  VFEIFRHSKV180
WTSEDLASFL  LGIRDHALFL  MGHYSNHDRS  SNWLSMETSA  LLQIAIMFPE  FKEAKEWFST240
AYGRVMHEVR  FCFSDNGIHM  EKTPIYHMVA  SIAFAQALVM  CKKNNIYVPD  YAWECIRRSA300
LYIISLIKPD  LSTPMIGDAD  RDDLTTRRSD  TSIYEGMNLS  FFPRDLNELR  AYMNWMYELF360
GDEEFRYFAT  LRKEGKEPAQ  KDYKYSEEGI  YVMRTGWDSN  ADYLCTHSTQ  LELGERSTHS420
HNDSMHAEVT  LKGEDILVDS  GRYIYRSSVW  KDWRAYFCSA  LAHNTLYVDD  HEMGEIKGVD480
RRRNVRALCH  FFGDVEGLKM  IDLSHNGYAY  LEDPVFHRRK  LIMAPGSVVI  LIDYVEGPAN540
ECHDFRLMYN  FNSTDVILND  KHIDYVSRGH  VPFELDFVAN  VDFASSYLCG  STDPKGGWIS600
YGYPVKEPSG  QVTMAYGGKA  PFMAATIIKS  KGDDSTVSID  GDKVILKTPS  GKWCITKEDV660
KRV663

Enzyme Prediction      help

No EC number prediction in MGYG000000677_00400.

CAZyme Signature Domains help

Created with Snap336699132165198232265298331364397430464497530563596629389533PL12
Family Start End Evalue family coverage
PL12 389 533 6.9e-27 0.9782608695652174

CDD Domains      download full data without filtering help

Created with Snap3366991321651982322652983313643974304644975305635966299345Hepar_II_III_N414552Hepar_II_III
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16889 Hepar_II_III_N 4.59e-62 9 345 2 339
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.
pfam07940 Hepar_II_III 6.62e-17 414 552 34 165
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Created with Snap33669913216519823226529833136439743046449753056359662914628AEV29592.1|PL1249627QST01889.1|PL1244563ALJ06119.1|PL1273640QHE52882.1|PL1227619AIQ34533.1|PL12
Hit ID E-Value Query Start Query End Hit Start Hit End
AEV29592.1 2.68e-233 14 628 20 637
QST01889.1 6.16e-57 49 627 27 593
ALJ06119.1 1.13e-54 44 563 77 566
QHE52882.1 1.45e-54 73 640 64 609
AIQ34533.1 2.32e-53 27 619 62 622

PDB Hits      download full data without filtering help

Created with Snap336699132165198232265298331364397430464497530563596629115394MMH_A115394MMI_A65395JMD_A65395JMF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MMH_A 9.84e-36 11 539 20 508
Crystalstructure of heparan sulfate lyase HepC from Pedobacter heparinus [Pedobacter heparinus]
4MMI_A 9.84e-36 11 539 20 508
Crystalstructure of heparan sulfate lyase HepC mutant from Pedobacter heparinus [Pedobacter heparinus]
5JMD_A 8.79e-34 6 539 17 528
HeparinaseIII-BT4657 gene product, Methylated Lysines [Bacteroides thetaiotaomicron VPI-5482]
5JMF_A 2.24e-30 6 539 17 528
HeparinaseIII-BT4657 gene product [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3366991321651982322652983313643974304644975305635966296568sp|C7EXL6|HEPC_BACSE11539sp|Q59289|HEPC_PEDHD
Hit ID E-Value Query Start Query End Hit Start Hit End Description
C7EXL6 2.60e-35 6 568 28 566
Heparin-sulfate lyase OS=Bacteroides stercoris OX=46506 GN=hepC PE=1 SV=1
Q59289 6.02e-35 11 539 44 532
Heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000677_00400.