logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001343_00239

You are here: Home > Sequence: MGYG000001343_00239

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Acinetobacter junii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter junii
CAZyme ID MGYG000001343_00239
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
590 MGYG000001343_39|CGC2 68411.66 7.4581
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001343 3338999 Isolate not provided not provided
Gene Location Start: 38643;  End: 40415  Strand: +

Full Sequence      Download help

MSQLQLKAKT  AWALGFMSLF  RVLKYRLSVR  IGLNSVQKLT  AQLPRGNFFS  SPRPNEESGA60
TVTDIPNWFY  NRFSHRQFKD  THLPWYQIPD  FDEQIGDIKG  IWEISRMQWV  LDFVVRERKQ120
QDGLALLELD  CWLNDWCCNN  PAYFGPNWKC  GQEASIRVMH  LIAAYLGLPN  RADPQIQLLD180
LIHVHLQRIS  PTIDYAIAQN  NNHGTSEATA  LYIGGVFLNH  FRPSSQAKQW  QDTGRYWLEN240
RAKCLIMADG  GFSQYSVNYH  RVMLDSYCLA  EIVRRQFDDK  TFSIRLQQQL  QRATDWLHVL300
TQVHGNAPNL  GANDGARLLV  VSATDYADFR  PSVQLASTLF  VGHSYYQTAG  TYDQVLVFFA360
LEKMQNQAFE  LPSKQQFFQD  SGLMTATIGP  FFLAFKLPIF  HFRPSQCDSL  HLDVWWHGEN420
LLRDGGTYSY  NSTLEDLDYF  SGTASHNTVQ  FDDHLQMPRL  SRFLFGDWLK  PKNLHYAKDH480
WRCGYQDAWG  GQHEREIILT  RHSIRVIDRV  SDFKRQAILR  WRLQPDHWVL  TPDGVSNGQI540
MLQLERPQNA  QMHLIQGEES  RNYYQKNPLP  VLEITVTQPT  TIVTIIKDLT  590

Enzyme Prediction      help

No EC number prediction in MGYG000001343_00239.

CAZyme Signature Domains help

Created with Snap295988118147177206236265295324354383413442472501531560391508PL12
Family Start End Evalue family coverage
PL12 391 508 1.5e-20 0.9130434782608695

CDD Domains      download full data without filtering help

Created with Snap295988118147177206236265295324354383413442472501531560377580Hepar_II_III202332Hepar_II_III_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 2.85e-20 377 580 8 225
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16889 Hepar_II_III_N 3.67e-04 202 332 208 338
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Created with Snap2959881181471772062362652953243543834134424725015315601590AWA49327.1|PL121590QXR10695.1|PL121590QUS50131.1|PL121590QXR27834.1|PL124590QNH51165.1|PL12
Hit ID E-Value Query Start Query End Hit Start Hit End
AWA49327.1 0.0 1 590 1 590
QXR10695.1 0.0 1 590 1 590
QUS50131.1 0.0 1 590 1 590
QXR27834.1 0.0 1 590 1 590
QNH51165.1 9.08e-274 4 590 3 604

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999825 0.000210 0.000003 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001343_00239.