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CAZyme Information: MGYG000000014_00174

You are here: Home > Sequence: MGYG000000014_00174

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium butyricum
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium butyricum
CAZyme ID MGYG000000014_00174
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
333 MGYG000000014_1|CGC2 34219.04 6.818
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000014 4564499 Isolate United Kingdom Europe
Gene Location Start: 166708;  End: 167709  Strand: +

Full Sequence      Download help

MKKVRNLCLI  AALSLIAVGG  SSFYQIPVNA  ATTIEVSNSG  TSLKDALAKA  KSGDIVNITG60
TVKSGTVNVP  AGVTITGEKG  KSKIDFSSTS  GSSGKGFVIK  SDGASIKNLD  VYGAADNGIY120
IEGSKNNITN  VNVYKNKDAG  VQLSNGAANN  TLTKVYSYSN  ADQTGENADG  FAIKLHSGEG180
NKLIECTAEG  NSDDGYDLYA  AHGAVTFIRC  KAINNGNCDG  IKGDGNGFKL  GGVDNKTSGV240
AAHLDPLNHE  LTDCIAIGNT  GSGFDRNNQN  GVVKMTNCTG  ENNGEYNFNF  PLKGKPSALG300
YEVTFGKAIM  NGCTSINGGN  VITGASLTDC  TGF333

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Created with Snap16334966839911613314916618319921623324926628329931637305PL9
Family Start End Evalue family coverage
PL9 37 305 1.3e-67 0.7032085561497327

CDD Domains      download full data without filtering help

Created with Snap16334966839911613314916618319921623324926628329931697279Beta_helix
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 3.97e-05 97 279 4 157
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Created with Snap1633496683991161331491661831992162332492662832993161333QSX04214.1|PL91333QJU44567.1|PL91333ALS17289.1|PL91333AXB85212.1|PL91333QCJ07648.1|PL9
Hit ID E-Value Query Start Query End Hit Start Hit End
QSX04214.1 3.02e-200 1 333 1 333
QJU44567.1 3.02e-200 1 333 1 333
ALS17289.1 3.02e-200 1 333 1 333
AXB85212.1 3.02e-200 1 333 1 333
QCJ07648.1 3.02e-200 1 333 1 333

PDB Hits      download full data without filtering help

Created with Snap1633496683991161331491661831992162332492662832993161572901RU4_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 8.44e-18 157 290 170 298
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Created with Snap163349668399116133149166183199216233249266283299316157290sp|P0C1A7|PLYL_DICD3157293sp|P0C1A6|PLYL_DICCH157302sp|P22751|PLYX_DICCH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A7 5.30e-17 157 290 195 323
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P0C1A6 5.87e-16 157 293 195 328
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P22751 8.10e-13 157 302 526 655
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000313 0.998950 0.000210 0.000169 0.000164 0.000152

TMHMM  Annotations      download full data without filtering help

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