CAZyme Information: MGYG000002638_00200

Basic Information

• Species: Lachnoanaerobaculum orale
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoanaerobaculum; Lachnoanaerobaculum orale
• CAZyme ID: MGYG000002638_00200
• CAZy Family: PL9
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1528		169251.57	4.8254

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002638	2571408	MAG	China	Asia

• Gene Location: Start: 28865; End: 33451 Strand: +

Full Sequence      

MKRNILRCFMAYILSILLLSNNLEVFASTLTNGIEITSETEERSDTVISKATDSNAKEWE
FTYFGPSTSTITNTVNDDADIDGEIILKSATYKKDGSIDKKGGKFVSSDPADGISFYYTK
IDPSKENFILEADVRIDYMNPKPDGQEGFALMVRDSIGEKGDPASSESNLVSIGATQLPK
GELNSTSQVKDMLGVRAYTGIDNKIKPNPDTFKVYRLGFDKDGGKVSSGDTYRVRLEKNS
SSYVVYQLAMDGSELYKYEIPIQAKDIRANSISGYEELNDPMNVQDRFAYVGFAVARGMN
VTYSNIKFEKSEFDANDWRPQESRYIDLQAKITSPDTAAEENYTLVFKANANGSAKIYQD
NVLKDSVEVVNNEELKKDYDLSAGKNFSVEFTPEAGYEPEPFVKLKSYETVTLNKSVSWR
TIGKDSYIYVSNTGLDVNDGSGYDNAISLESAIKYAKPGQTILLKPEVYDMSNKSLIVQK
GRNGREDNPIRIQGDGGFATLDFKRSGKGFSLGGDYWELKQFNITNTADGYKGLGISGSH
NIAERLNLFNNGTTGLQISGSSEDSKDKWPSYNYILNCTSMNNADSAMEDADGFAAKITS
GVGNVFDGCIAAYNADDGWDLFAKVATGSIGDVTIKNSVAYRNGYILIKNGGNKKNFEFA
PGTVDEYGNVSFDKPNIMLDAGNGNGFKMGGSNVSGAHKLDNSISYENKAKGIDSNSGPN
IKISNSTSYNNGSYNVALYTSDKTLTTDFSAKGILSFRKETNIGEQLSLQNQQSSDVMDE
TTFYWNKDENISKNTASKVITMDENDFINLDTENDPKRNEDGKINMNGLLLLKPEAKEKL
SSGAGGRAFGEKENIATVWAVGDSTVSGFNDNYYIPRVGYGEELKNYLNAEVYNLAVSGA
SSKDFTTMKNYDVLLNGNSDVPKLGDGDNEKFLIIGFGHNDEKSELSRYTDPNSSYENEG
SFANSVYKNYVKPALERGVTPIIVTPIARLTDDNTSESYNSPSGHITNDVVVGNNIFKGG
DYRKALIDMSNQLGLEYIDLTEKTIDLNIEMGNDARYLYAYTGAKKEGDNLVPKGLDKTH
TNLYGAKRNAYLIANADTTLKKYSKKREYPVKEDFFEDAVNKDYKVIDYITPTEESKNWP
EFLDVVGNVFTGSVFGNVGGEDKITGGDFEVFKSDKSINLTVKNNRGKIASNVDGIMMYY
KRLPENTEFTLKAKVKINDIAKNDQVSFGLMARDDMYVDRSITDSIGDYVVAGSRMQGKI
NGFGRKNSKLYDGGVANIIYQKGDELDLTLTKTQDGYMVKYGENEPVSAGFDYPLTQIDS
EYIYVGFFVARNANITFSDVSLKLKDNVDNEKNKAGEKIVPDTPSKNNNITEEKPKDGLP
NDSKKDQNTVENHHQEVAEHSKVSDNKNKPASDDSRVVIPKNSNSKAKNRRSSSSSRSSS
KGSKKVFHNTFTGWKPETVDGHNVWKYVENGKNVTSQWAYIFNPYTNRNAWFKFDKDGIM
ETGWINENGINYYLSEISDGSLGEWIKK

Enzyme Prediction     

No EC number prediction in MGYG000002638_00200.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL9	426	836	9.1e-107	0.9786666666666667
CE12	857	1095	7.3e-39	0.9857142857142858

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd01821	Rhamnogalacturan_acetylesterase_like	1.08e-33	857	1094	2	195	Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
NF033840	PspC_relate_1	0.002	1452	1527	550	615	PspC-related protein choline-binding protein 1. Members of this family share C-terminal homology to the choline-binding form of the pneumococcal surface antigen PspC, but not to its allelic LPXTG-anchored forms because they lack the choline-binding repeat region. Members of this family should not be confused with PspC itself, whose identity and function reflect regions N-terminal to the choline-binding region. See Iannelli, et al. (PMID: 11891047) for information about the different allelic forms of PspC.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CBL00444.1	0.0	50	1342	32	1327
QPL60595.1	4.00e-129	50	838	83	859
AYQ60810.1	7.60e-129	50	838	83	859
AWX46906.1	7.60e-129	50	838	83	859
AYA33762.1	7.60e-129	50	838	83	859

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RU4_A	1.17e-34	429	732	18	293	ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A	5.87e-10	571	716	168	303	Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P22751	2.10e-42	74	735	69	643	Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6	3.47e-36	429	732	43	318	Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7	1.03e-33	429	732	43	318	Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
O31528	1.35e-13	858	1094	5	199	Probable rhamnogalacturonan acetylesterase YesY OS=Bacillus subtilis (strain 168) OX=224308 GN=yesY PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000392	0.998855	0.000232	0.000178	0.000164	0.000152

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002638_00200.