logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000001_01618

You are here: Home > Sequence: MGYG000000001_01618

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species GCA-900066495 sp902362365
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; GCA-900066495; GCA-900066495 sp902362365
CAZyme ID MGYG000000001_01618
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
798 MGYG000000001_21|CGC1 87125.25 9.4923
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000001 3219617 Isolate United Kingdom Europe
Gene Location Start: 43965;  End: 46361  Strand: -

Full Sequence      Download help

MRKRIALTAL  AMVPFSVSHA  NEAELVGIIT  AETLNVRSGP  GSNFEVLYMV  NKDDRVTITD60
TSNGWHKVKN  NEDKEGWISS  KYISISESSE  TVSRSSSYEQ  KEVNTNGLNM  RSGASTSYRV120
ITTLNKGTKV  EVISESNGWS  KIKYDGRLGY  VYSIYLDDIK  PSYTNTTTKT  VNTNSLNVRS180
GPSTSNSIVG  KLSKGTKVSV  ISDSNGWSKI  LYNNKECYVS  SRYLDSKSSS  SDNSNNNSSN240
STIKETKEVN  TDSLNVRTGP  STSYSKLGTL  SKGTKVGVIS  ESNGWSKILY  NNKEAYVSSQ300
YLSKISSGST  DDNTSNTVKE  TKEVNTDSLN  VRSGPSTSYS  KLGTLSKGTK  VGVISESNGW360
SKILYNNKEA  YVSSQYLSKI  SSGSTDDNTS  NTVKETKEVN  TDSLNVRSGP  STSYSKLGTL420
SKGTKVGVIS  ESNGWSKILY  NNKEAYVSSQ  YLSKISSGST  DDNTSNTVKE  TKEVNTDSLN480
VRSGPSTSYS  KLGTLSKGTK  VGVISERNGW  SKILYNDKEA  YVSSQYLSEV  GSESGDTGSG540
STDVDTGAFG  QGTVSDLLLS  YTFEQHLSKQ  VSVSESGYNR  ANGSKATKLQ  IEEKLNPSKI600
ISASSYGKLQ  FLRIDRYTDG  ITASELNKFL  NSKVSSSNVF  YNKGQQFIDA  AKKYDIDVVY660
FVAHCMWETG  YGSSTLAKGQ  TLTTYKGQAL  SKPVTVYNFF  GIGAYDGTAN  LSGAETAYKY720
GWTSIDATIE  GSAKWIAANY  IKHSSYKQNT  VYKMKWNYGS  HQYATDINWC  NGIASVMNSL780
IGYYDNQSKL  VYERLVYK798

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Created with Snap3979119159199239279319359399438478518558598638678718758644779GH73
Family Start End Evalue family coverage
GH73 644 779 2.1e-23 0.9609375

CDD Domains      download full data without filtering help

Created with Snap3979119159199239279319359399438478518558598638678718758567781LytD324471YgiM249396YgiM399527YgiM642785LYZ2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 1.25e-43 567 781 30 229
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
COG3103 YgiM 2.17e-19 324 471 29 168
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
COG3103 YgiM 5.43e-19 249 396 29 168
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
COG3103 YgiM 6.92e-18 399 527 29 149
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only].
smart00047 LYZ2 5.59e-17 642 785 11 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.

CAZyme Hits      help

Created with Snap39791191591992392793193593994384785185585986386787187581798QJA09065.1|GH731793CEI73566.1|GH731798CED94424.1|GH731798QYE98702.1|GH731798CEK37256.1|GH73
Hit ID E-Value Query Start Query End Hit Start Hit End
QJA09065.1 0.0 1 798 1 872
CEI73566.1 1.72e-283 1 793 1 804
CED94424.1 3.55e-256 1 798 1 806
QYE98702.1 1.63e-242 1 798 2 811
CEK37256.1 1.37e-236 1 798 2 899

PDB Hits      download full data without filtering help

Created with Snap39791191591992392793193593994384785185585986386787187585807795WQW_A6087856FXO_A6217784PI7_A6217784PI8_A5597776U0O_B
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5WQW_A 2.98e-37 580 779 36 252
X-raystructure of catalytic domain of autolysin from Clostridium perfringens [Clostridium perfringens str. 13]
6FXO_A 5.40e-29 608 785 61 229
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 3.62e-25 621 778 65 209
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 2.28e-24 621 778 65 209
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 2.52e-20 559 777 48 256
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3979119159199239279319359399438478518558598638678718758471785sp|P39848|LYTD_BACSU584785sp|O33635|ATL_STAEP584785sp|Q5HQB9|ATL_STAEQ584785sp|Q8CPQ1|ATL_STAES608785sp|Q8NX96|ATL_STAAW
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 3.56e-30 471 785 632 868
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
O33635 3.80e-29 584 785 1129 1320
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 3.80e-29 584 785 1129 1320
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q8CPQ1 3.80e-29 584 785 1129 1320
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q8NX96 1.11e-25 608 785 1073 1241
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000318 0.998958 0.000197 0.000194 0.000168 0.000148

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000001_01618.