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CAZyme Information: MGYG000000002_00114

You are here: Home > Sequence: MGYG000000002_00114

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Blautia_A faecis
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Blautia_A; Blautia_A faecis
CAZyme ID MGYG000000002_00114
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
448 50784.65 4.5606
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000002 4433109 Isolate United Kingdom Europe
Gene Location Start: 135397;  End: 136743  Strand: +

Full Sequence      Download help

MTKKQEFVPR  EIREKPLYEL  ESVEDIPVSE  LYQVKVNGKE  QRVYHTEFFD  FVSFLDENEK60
AEVEVTVNEP  FQKAVIRPAA  AQIPFKEEGN  KISISLPAGK  RITLELDDKL  ESPLYVLPGK120
YIPKPENATY  VFESGKAYNV  GCLQLNSDET  VYIEYGAVVS  GRIYSRMADR  VRILGNGILY180
GGNWHAWDEN  GAEQLIVPVL  GENIEIRGIT  LLDGGSWHIV  PVACKNVLIE  DVNVLGKVIT240
GDGVDIVGCE  NVVLRNCFIR  ANDDCISIKA  VEFQDPSGCT  DVKHILVEDC  LFWNAEFGNT300
LEIGYETRCD  EITDVVFRNC  DVVHCQYEGN  QSGGVLTIHN  ADRAHVHDIV  YENIRIEDAQ360
EKFIDIKTLD  SKYSRDRERG  MVNDIFFKNI  EITEGTFPVS  IIRGFEMKNE  VCRPHGFYFD420
NVVIHGKKVM  SPGELHMVVE  LSDELKFQ448

Enzyme Prediction      help

No EC number prediction in MGYG000000002_00114.

CAZyme Signature Domains help

Created with Snap22446789112134156179201224246268291313336358380403425157428GH28
Family Start End Evalue family coverage
GH28 157 428 2.6e-45 0.76

CDD Domains      download full data without filtering help

Created with Snap22446789112134156179201224246268291313336358380403425170404Pgu1132431Glyco_hydro_28173382PLN03003202373PLN03010163268PLN02793
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 7.47e-15 170 404 200 407
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 3.38e-11 132 431 9 310
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 1.60e-07 173 382 117 317
Probable polygalacturonase At3g15720
PLN03010 PLN03010 1.85e-06 202 373 166 320
polygalacturonase
PLN02793 PLN02793 1.11e-04 163 268 137 254
Probable polygalacturonase

CAZyme Hits      help

Created with Snap2244678911213415617920122424626829131333635838040342532448QHW32786.1|GH2832448QHT63269.1|GH2831448QOY89194.1|GH2827447AZN40317.1|GH2826448QJC51520.1|GH28
Hit ID E-Value Query Start Query End Hit Start Hit End
QHW32786.1 7.00e-106 32 448 39 459
QHT63269.1 1.09e-105 32 448 31 451
QOY89194.1 5.01e-68 31 448 32 445
AZN40317.1 1.52e-60 27 447 10 428
QJC51520.1 3.84e-56 26 448 10 430

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap22446789112134156179201224246268291313336358380403425141396sp|P35338|PGLR2_MAIZE169396sp|P26216|PGLR1_MAIZE119396sp|P35339|PGLR3_MAIZE173389sp|Q9LW07|PGLR3_ARATH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P35338 1.61e-09 141 396 104 356
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P26216 1.57e-08 169 396 128 356
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1
P35339 4.88e-08 119 396 81 356
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1
Q9LW07 1.26e-07 173 389 117 326
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000002_00114.