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CAZyme Information: MGYG000000003_00272

You are here: Home > Sequence: MGYG000000003_00272

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes shahii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes shahii
CAZyme ID MGYG000000003_00272
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
905 103218.1 7.0044
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000003 3229518 Isolate United Kingdom Europe
Gene Location Start: 299735;  End: 302452  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000003_00272.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 23 671 2.3e-75 0.6768617021276596

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 4.75e-22 29 466 14 446
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 3.32e-21 18 449 2 443
beta-D-glucuronidase; Provisional
pfam00703 Glyco_hydro_2 2.89e-11 198 305 1 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10340 ebgA 2.12e-09 95 474 113 506
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 9.13e-09 95 428 124 462
beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63994.1 0.0 1 905 1 905
QPH40113.1 0.0 23 904 24 906
AZI26708.1 0.0 23 904 24 906
QIH37197.1 0.0 28 904 20 896
QMV71213.1 0.0 28 904 20 896

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GM8_A 5.83e-21 34 466 13 436
ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482]
5EUV_A 4.26e-16 58 454 27 391
ChainA, Beta-D-galactosidase [Paracoccus sp. 32d],5EUV_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d],5LDR_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d]
5LDR_A 4.26e-16 58 454 28 392
ChainA, Beta-D-galactosidase [Paracoccus sp. 32d]
6U7I_A 7.76e-16 81 428 54 412
Faecalibacteriumprausnitzii Beta-glucuronidase [Faecalibacterium prausnitzii],6U7I_B Faecalibacterium prausnitzii Beta-glucuronidase [Faecalibacterium prausnitzii],6U7I_C Faecalibacterium prausnitzii Beta-glucuronidase [Faecalibacterium prausnitzii],6U7I_D Faecalibacterium prausnitzii Beta-glucuronidase [Faecalibacterium prausnitzii]
6HPD_A 6.18e-15 33 504 43 509
Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6LL68 7.55e-16 119 459 149 488
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
Q7MG04 8.82e-15 119 428 150 457
Beta-galactosidase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=lacZ PE=3 SV=1
Q8D4H3 8.83e-15 119 428 150 458
Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2
T2KN75 3.37e-14 33 504 34 500
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
T2KPJ7 6.91e-14 93 435 105 437
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001880 0.993425 0.003205 0.000483 0.000464 0.000498

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000003_00272.