You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000000003_01248
You are here: Home > Sequence: MGYG000000003_01248
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Alistipes shahii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes shahii | |||||||||||
| CAZyme ID | MGYG000000003_01248 | |||||||||||
| CAZy Family | PL13 | |||||||||||
| CAZyme Description | Heparin lyase I | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 604603; End: 605748 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL13 | 24 | 378 | 6.1e-193 | 0.9862258953168044 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14099 | Polysacc_lyase | 2.09e-14 | 70 | 371 | 28 | 208 | Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBK62841.1 | 4.74e-289 | 4 | 381 | 1 | 378 |
| QDO67520.1 | 4.25e-173 | 2 | 381 | 3 | 385 |
| QUT89934.1 | 2.20e-172 | 3 | 381 | 5 | 385 |
| AVM56394.1 | 1.36e-171 | 2 | 381 | 4 | 384 |
| ALJ58949.1 | 2.54e-171 | 3 | 381 | 5 | 385 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ILR_A | 2.98e-169 | 30 | 379 | 9 | 370 | Structureof Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product [Bacteroides thetaiotaomicron] |
| 3IKW_A | 3.44e-169 | 30 | 379 | 13 | 374 | Structureof Heparinase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron] |
| 3IMN_A | 4.33e-166 | 30 | 379 | 15 | 376 | Crystalstructure of heparin lyase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron],3IN9_A Crystal structure of heparin lyase I complexed with disaccharide heparin [Bacteroides thetaiotaomicron] |
| 3INA_A | 1.43e-164 | 30 | 379 | 15 | 376 | Crystalstructure of heparin lyase I H151A mutant complexed with a dodecasaccharide heparin [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q05819 | 9.95e-159 | 3 | 381 | 5 | 384 | Heparin lyase I OS=Pedobacter heparinus OX=984 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000095 | 0.043591 | 0.956279 | 0.000017 | 0.000022 | 0.000019 |