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CAZyme Information: MGYG000000003_02605

You are here: Home > Sequence: MGYG000000003_02605

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes shahii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes shahii
CAZyme ID MGYG000000003_02605
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
621 MGYG000000003_8|CGC1 69376.68 5.0127
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000003 3229518 Isolate United Kingdom Europe
Gene Location Start: 13064;  End: 14929  Strand: +

Full Sequence      Download help

MFGMSIRKFI  ILSALIVSGC  ISHPETIDID  FDSGTEDYTP  LVRKILAEHP  AGEVTIRFGA60
GTFDFYPEQA  AGSYLCVSNN  DNGYKRCAFL  LEEMRRVRIE  GTGEKTQLRF  HGAIVPFRVA120
RCEQIVFEAF  TIDYDASFIF  EGLVVGNDPR  THSITLRPLD  PERFEIRSGE  PWFTGYDWAS180
PFGENILFDP  GTRSPYYQAE  QYEHDQKKTL  QAEWIGDSLV  RLSGYSSREL  PPVGSVYTDK240
GPHSTNRRYP  GFSFYKSAGV  EVRNVTLHDS  GGMALIAENC  RNVVCSQYRV  EVPPQSGRMV300
SASADATHFV  GCSGKIVLRA  CRFESMLDDA  TNIHGVYMTV  VDRLSGNRFG  ASFGHFQQEG360
FDFAEQGDSL  VFIDRADLGV  LGCGRVEEVN  HVNENYYIIR  TGFDLSTIPD  SVHIAVGNRA420
ADADVEISEC  TVRYNRARSF  LLSTPGDVCV  ENSDLSSMMA  GIRICGDANY  WFESGRTRNV480
VIRNNRFGTM  ATGGCSPQAV  LQIDPVISHN  ARSGGTPYHG  CIRFEGNLVE  SFDNQLIYAL540
SVDSLVISRN  RFVDSRRFEP  RFAGLSVIDA  QHCRSVTVRD  NDFSGWKENS  TISLVDCSEH600
CLEGEEMPRM  VENPNPYFYE  N621

Enzyme Prediction      help

No EC number prediction in MGYG000000003_02605.

CAZyme Signature Domains help

Created with Snap31629312415518621724827931034137240343446549652755858934581GH110
Family Start End Evalue family coverage
GH110 34 581 2.2e-130 0.9762773722627737

CDD Domains      help

MGYG000000003_02605 has no CDD domain.

CAZyme Hits      help

Created with Snap3162931241551862172482793103413724034344654965275585891621AFL77292.1|GH11016621QDH53926.1|GH11036594EDM26187.1|GH11034598QDV61916.1|GH11035595AFL78386.1|GH110
Hit ID E-Value Query Start Query End Hit Start Hit End
AFL77292.1 0.0 1 621 1 621
QDH53926.1 6.06e-205 16 621 18 620
EDM26187.1 2.95e-107 36 594 36 594
QDV61916.1 4.14e-103 34 598 32 591
AFL78386.1 1.66e-98 35 595 37 591

PDB Hits      download full data without filtering help

Created with Snap316293124155186217248279310341372403434465496527558589225917JW4_A225917JWF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 3.05e-59 22 591 23 606
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 1.54e-58 22 591 23 606
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Created with Snap31629312415518621724827931034137240343446549652755858936594sp|B1KD83|GLAA_SHEWM40585sp|Q89ZX0|GLAB_BACTN54562sp|A6LFT2|GLAB_PARD844580sp|A6KWM0|GLAB1_PHOV839560sp|Q5LGZ8|GLAB_BACFN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1KD83 1.46e-62 36 594 46 593
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
Q89ZX0 1.17e-60 40 585 45 586
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
A6LFT2 7.33e-58 54 562 62 571
Alpha-1,3-galactosidase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=glaB PE=3 SV=1
A6KWM0 1.87e-57 44 580 49 592
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
Q5LGZ8 1.84e-55 39 560 43 575
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000001 0.000002 1.000053 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000003_02605.