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CAZyme Information: MGYG000000003_02606

You are here: Home > Sequence: MGYG000000003_02606

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes shahii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes shahii
CAZyme ID MGYG000000003_02606
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
607 MGYG000000003_8|CGC1 68392.38 6.9033
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000003 3229518 Isolate United Kingdom Europe
Gene Location Start: 14919;  End: 16742  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000003_02606.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 29 581 7.5e-133 0.9945255474452555

CDD Domains      help

MGYG000000003_02606 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFL77293.1 0.0 1 607 1 607
BCI63973.1 1.72e-126 15 601 12 605
QUT74399.1 1.07e-125 28 581 26 586
AHF13562.1 2.61e-123 28 601 14 586
SDS24258.1 5.88e-99 28 584 30 585

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 9.35e-70 32 594 32 609
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 4.88e-69 32 594 32 609
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89ZX0 1.87e-85 11 585 11 586
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
B1KD83 3.85e-71 32 594 37 593
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
Q5L7M8 7.15e-70 1 585 1 583
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
A6L2M8 2.69e-69 15 583 12 595
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1
Q64MU6 1.96e-68 1 585 1 583
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001340 0.997638 0.000371 0.000210 0.000210 0.000212

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000003_02606.