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CAZyme Information: MGYG000000003_02606

You are here: Home > Sequence: MGYG000000003_02606

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes shahii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes shahii
CAZyme ID MGYG000000003_02606
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
607 MGYG000000003_8|CGC1 68392.38 6.9033
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000003 3229518 Isolate United Kingdom Europe
Gene Location Start: 14919;  End: 16742  Strand: +

Full Sequence      Download help

MKISRYILPI  LATAWIGSVS  SRPFGDTLRM  RDFGALPDSG  EDASEALRKA  VATIGKREIP60
TVLCFEAGRY  DFHAPGEQDD  RVNIVARLRG  IRDLIIDGGG  AEFIAHGRLM  LFLAEECERL120
TIRNFSLDWE  RPYITQASIV  ALGGGHVDLA  IDRKRYPYHI  EKGRIRFTDE  TWEREIDPES180
YSTAYDPQSG  AVLYGTRDCP  LSDRNAIFRG  EAREIAPDTV  RFFGTVDRPL  PIGTELALYH240
GRYLSNAMTV  VNCRNVRFEK  IDLRHSPGMG  VYGLRSENIL  LKAVCTVVNR  SEKRRFSCAA300
DAFHFTNCRG  LIELDGCNCN  GQGDDALNIH  GTYARIVAVS  KDRKQIELFG  VRFPAERVFE360
ADDEIWPIVR  TTGSRGARNR  IERIVKKSGK  RLVVALREPL  DKTFREDDFI  ENASWYANVS420
IHDCYFGRAN  RARGILLTTP  GKVVVHNNRF  MTAGTAILIE  GDTDYWFESG  AVCDMDIHDN480
LFENCGTSAS  NNGGSGWGEA  LICITPSFRP  ADENSPVYHR  NIRIRNNRIL  TYDRPLLHAR540
SVGGLQFVAN  CVEQTYDFPA  TAAQHQSFCL  EGCRNVRIAE  NRFIGYDKPD  FELIHMNPNN600
ICHEEAK607

Enzyme Prediction      help

No EC number prediction in MGYG000000003_02606.

CAZyme Signature Domains help

Created with Snap30609112115118221224227330333336439442445548551554657629581GH110
Family Start End Evalue family coverage
GH110 29 581 7.5e-133 0.9945255474452555

CDD Domains      help

MGYG000000003_02606 has no CDD domain.

CAZyme Hits      help

Created with Snap3060911211511822122422733033333643944244554855155465761607AFL77293.1|GH11015601BCI63973.1|GH11028581QUT74399.1|GH11028601AHF13562.1|GH11028584SDS24258.1|GH110
Hit ID E-Value Query Start Query End Hit Start Hit End
AFL77293.1 0.0 1 607 1 607
BCI63973.1 1.72e-126 15 601 12 605
QUT74399.1 1.07e-125 28 581 26 586
AHF13562.1 2.61e-123 28 601 14 586
SDS24258.1 5.88e-99 28 584 30 585

PDB Hits      download full data without filtering help

Created with Snap306091121151182212242273303333364394424455485515546576325947JW4_A325947JWF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 9.35e-70 32 594 32 609
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 4.88e-69 32 594 32 609
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Created with Snap30609112115118221224227330333336439442445548551554657611585sp|Q89ZX0|GLAB_BACTN32594sp|B1KD83|GLAA_SHEWM1585sp|Q5L7M8|GLAA_BACFN15583sp|A6L2M8|GLAB2_PHOV81585sp|Q64MU6|GLAA_BACFR
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89ZX0 1.87e-85 11 585 11 586
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
B1KD83 3.85e-71 32 594 37 593
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
Q5L7M8 7.15e-70 1 585 1 583
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
A6L2M8 2.69e-69 15 583 12 595
Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1
Q64MU6 1.96e-68 1 585 1 583
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001340 0.997638 0.000371 0.000210 0.000210 0.000212

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000003_02606.