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CAZyme Information: MGYG000000006_00846

You are here: Home > Sequence: MGYG000000006_00846

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus xylosus
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus xylosus
CAZyme ID MGYG000000006_00846
CAZy Family GH23
CAZyme Description putative transglycosylase IsaA
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
243 25338.46 6.0907
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000006 2822527 Isolate United Kingdom Europe
Gene Location Start: 467;  End: 1198  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000006_00846.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033849 ser_rich_anae_1 3.44e-05 75 225 277 435
serine-rich protein. This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.
PLN03198 PLN03198 0.002 27 175 9 155
delta6-acyl-lipid desaturase; Provisional
cd00254 LT-like 0.008 179 202 6 29
lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARD75511.1 6.90e-152 1 243 1 243
CEF17750.1 5.67e-151 1 243 1 243
QKQ30828.1 1.67e-128 1 243 1 248
QKQ09419.1 1.67e-128 1 243 1 248
QKQ07494.1 1.67e-128 1 243 1 248

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7IY64 1.13e-151 1 243 1 243
Probable transglycosylase IsaA OS=Staphylococcus xylosus OX=1288 GN=isaA PE=1 SV=1
Q4L980 3.37e-84 1 243 1 238
Probable transglycosylase IsaA OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=isaA PE=3 SV=1
Q4A0G5 1.29e-67 1 202 1 209
Probable transglycosylase IsaA OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=isaA PE=3 SV=1
Q2YWD9 1.44e-38 1 215 1 214
Probable transglycosylase IsaA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=isaA PE=3 SV=1
Q2FDT8 1.44e-38 1 215 1 214
Probable transglycosylase IsaA OS=Staphylococcus aureus (strain USA300) OX=367830 GN=isaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001806 0.996804 0.000343 0.000413 0.000320 0.000285

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000006_00846.