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CAZyme Information: MGYG000000006_00894

You are here: Home > Sequence: MGYG000000006_00894

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus xylosus
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus xylosus
CAZyme ID MGYG000000006_00894
CAZy Family GT2
CAZyme Description D-alanine--poly(phosphoribitol) ligase subunit 1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2380 MGYG000000006_5|CGC1 271221.39 5.7368
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000006 2822527 Isolate United Kingdom Europe
Gene Location Start: 46989;  End: 54131  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000006_00894.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12316 PRK12316 0.0 355 1987 1937 3615
peptide synthase; Provisional
PRK05691 PRK05691 0.0 725 2002 374 1719
peptide synthase; Validated
PRK12316 PRK12316 0.0 1003 1990 52 1080
peptide synthase; Provisional
PRK05691 PRK05691 0.0 343 1988 1058 2769
peptide synthase; Validated
PRK12467 PRK12467 0.0 357 1988 449 2157
peptide synthase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND46664.1 3.31e-239 377 1981 965 2649
BAZ00088.1 5.02e-147 909 2002 2140 3300
BAZ75991.1 5.02e-147 909 2002 2140 3300
BAY30132.1 2.03e-146 909 2002 2142 3302
BAY90071.1 2.49e-145 909 2002 2131 3291

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MFZ_A 3.20e-255 404 1990 191 1793
Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
6MFY_A 4.94e-240 404 1914 191 1714
Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis]
5U89_A 2.88e-154 399 1414 3 1059
Crystalstructure of a cross-module fragment from the dimodular NRPS DhbF [Geobacillus sp. Y4.1MC1]
6MFW_A 2.11e-142 404 1411 191 1195
Crystalstructure of a 4-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis]
6MFX_A 9.66e-142 426 1411 211 1195
Crystalstructure of a 4-domain construct of a mutant of LgrA in the substrate donation state [Brevibacillus parabrevis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O68008 2.87e-318 353 1990 391 2059
Bacitracin synthase 3 OS=Bacillus licheniformis OX=1402 GN=bacC PE=3 SV=1
P0C064 2.96e-318 392 2000 1477 3128
Gramicidin S synthase 2 OS=Brevibacillus brevis OX=1393 GN=grsB PE=1 SV=2
O30409 2.39e-311 304 1990 3453 5186
Tyrocidine synthase 3 OS=Brevibacillus parabrevis OX=54914 GN=tycC PE=1 SV=1
P0C063 6.03e-311 392 2000 1477 3129
Gramicidin S synthase 2 OS=Aneurinibacillus migulanus OX=47500 GN=grsB PE=3 SV=2
O30408 4.51e-295 308 1989 1389 3105
Tyrocidine synthase 2 OS=Brevibacillus parabrevis OX=54914 GN=tycB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000065 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000006_00894.