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CAZyme Information: MGYG000000006_01040

You are here: Home > Sequence: MGYG000000006_01040

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus xylosus
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus xylosus
CAZyme ID MGYG000000006_01040
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
258 MGYG000000006_6|CGC2 29534.32 5.0884
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000006 2822527 Isolate United Kingdom Europe
Gene Location Start: 60645;  End: 61421  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000006_01040.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 114 241 4.5e-24 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 1.09e-92 16 257 3 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 8.10e-32 103 246 2 144
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 8.25e-11 114 192 1 76
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDW88509.1 1.29e-184 1 258 1 258
CEF18074.1 7.45e-184 1 258 1 258
AID42069.1 7.45e-184 1 258 1 258
AID02140.1 2.39e-180 1 258 1 258
ARD75218.1 2.39e-180 1 258 1 258

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4PI7_A 4.48e-96 35 257 5 227
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 3.65e-95 35 257 5 227
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6FXP_A 6.46e-53 29 253 10 241
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 7.65e-53 29 253 40 271
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXO_A 4.31e-48 35 246 8 232
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NX96 1.29e-43 35 246 1020 1244
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1
Q6GAG0 1.29e-43 35 246 1014 1238
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1
Q5HQB9 1.30e-43 95 246 1164 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
O33635 1.30e-43 95 246 1164 1323
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q8CPQ1 1.30e-43 95 246 1164 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.950506 0.042612 0.001380 0.000282 0.000169 0.005071

TMHMM  Annotations      download full data without filtering help

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