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CAZyme Information: MGYG000000009_00531

You are here: Home > Sequence: MGYG000000009_00531

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ligilactobacillus murinus
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus; Ligilactobacillus murinus
CAZyme ID MGYG000000009_00531
CAZy Family CBM50
CAZyme Description D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
427 MGYG000000009_6|CGC1 44962.8 5.4988
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000009 2219792 Isolate United Kingdom Europe
Gene Location Start: 32518;  End: 33801  Strand: +

Full Sequence      Download help

MNHTARKLLV  GTVGAAGLFL  ATTATANADT  THKVAKNDTV  WDLSQKYGVS  IQAIETLNNI60
DQNSHLIVTG  QTLKVPAKDA  QVAKNNAPAQ  VTDKKADTAN  TSEVTVKAGD  TLWTLAQQYN120
TSVEKLRELN  GLAADAYLIH  PGNVLKVNGT  VQATQQPAQT  EQPVQQQAQP  EQPVVQQEAT180
QEQAQEPQLV  VSANHTTHTV  QAGESLYSIA  QAYGVTVDSL  RAANNLGATL  LVGQTLTIND240
PAKDPAQEAA  AQQAAAQAQQ  EAATQQAATQ  VQQPVQNQAP  AQTQAPAQQV  QQQAQPAQVQ300
QPQQQVVSTS  ADGAAIAAYA  QSFIGTPYVW  GGSTPSGFDC  SGLTQYVYAH  FGKQIGRNTI360
AQESAGAHIP  VSQAQVGDLL  FWGTPGSTYH  VAIYLGGNSF  VAAPEPGQSV  KIGNMAYFMP420
SFAVHVN427

Enzyme Prediction      help

No EC number prediction in MGYG000000009_00531.

CDD Domains      download full data without filtering help

Created with Snap21426485106128149170192213234256277298320341362384405325415NLPC_P6034415PRK13914322412Spr322412NlpC_p60_RipB32238PRK06347
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 1.03e-34 325 415 1 91
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
PRK13914 PRK13914 6.71e-26 34 415 32 466
invasion associated endopeptidase.
COG0791 Spr 2.58e-25 322 412 84 179
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
NF033742 NlpC_p60_RipB 6.48e-25 322 412 86 188
NlpC/P60 family peptidoglycan endopeptidase RipB.
PRK06347 PRK06347 1.90e-22 32 238 408 591
1,4-beta-N-acetylmuramoylhydrolase.

CAZyme Hits      help

Created with Snap214264851061281491701922132342562772983203413623844051427QIA89089.1|CBM501427AWZ39822.1|CBM501427AWZ38852.1|CBM501427QHQ70771.1|CBM501427QCQ04928.1|CBM50
Hit ID E-Value Query Start Query End Hit Start Hit End
QIA89089.1 2.80e-249 1 427 1 432
AWZ39822.1 6.34e-248 1 427 1 431
AWZ38852.1 6.34e-248 1 427 1 431
QHQ70771.1 2.78e-222 1 427 1 484
QCQ04928.1 5.67e-219 1 427 1 472

PDB Hits      download full data without filtering help

Created with Snap214264851061281491701922132342562772983203413623844053104246B8C_A3224123I86_A3204123PBI_A3154127CFL_A3214124Q4T_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6B8C_A 7.60e-45 310 424 25 140
Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]
3I86_A 7.45e-14 322 412 21 123
Crystalstructure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis],3I86_B Crystal structure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis]
3PBI_A 1.79e-13 320 412 92 196
ChainA, Invasion Protein [Mycobacterium tuberculosis]
7CFL_A 4.48e-13 315 412 16 117
ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile]
4Q4T_A 5.90e-13 321 412 351 454
Structureof the Resuscitation Promoting Factor Interacting protein RipA mutated at E444 [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits      download full data without filtering help

Created with Snap21426485106128149170192213234256277298320341362384405310424sp|P13692|P54_ENTFC21416sp|O31852|CWLS_BACSU33422sp|P54421|LYTE_BACSU31418sp|O07532|LYTF_BACSU6242sp|Q2FJH7|SLE1_STAA3
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P13692 1.92e-38 310 424 399 514
Protein P54 OS=Enterococcus faecium OX=1352 PE=3 SV=2
O31852 2.97e-28 21 416 77 399
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
P54421 5.75e-28 33 422 29 328
Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1
O07532 3.71e-26 31 418 175 477
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
Q2FJH7 3.31e-22 6 242 3 205
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain USA300) OX=367830 GN=sle1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000415 0.998595 0.000196 0.000314 0.000245 0.000191

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000009_00531.