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CAZyme Information: MGYG000000013_00525
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides sp902362375 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375 | |||||||||||
| CAZyme ID | MGYG000000013_00525 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 58385; End: 59695 Strand: + | |||||||||||
Full Sequence Download help
| MIKSAILIVA ACCSLQLFSQ EKFPDGKMIP DWFYQNEKTD ISIMGKKFLI TDYGVVNDST | 60 |
| LLQTEKIQAV IDLASDNGGG VVVIPEGTYL SGALFFKPGT HLHLESKAIL KGSDDISNFP | 120 |
| VIETRMEGQN LKYFSALINV DKIDGFTLSG KGTIDGNGER YWKSFWLRRR VIPKCTNMDE | 180 |
| LRPRLLHISH SNNVQISDVR LVNSPFWTTH IYKCDSVKLL DLHIYSPSSP VKAPSTDAID | 240 |
| IDACKNVLVK GCYMSVNDDA IALKGGKGPW ADQDPDNGGN CDIIIEDCTF GFCHGVLTCG | 300 |
| SESIYNHNII LRRCDLDQAK RLLWLKMRPD TPQQYKYILV EDVKGNVRNC IFIAPWTQFY | 360 |
| DLKDRKDMPV SYSSYITMRN IHLDCDSFFA VEKSNQYKLS NFCFDNLAIK AKKDVKIDEN | 420 |
| IIDSLIIRKV EITKVN | 436 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.20e-48 | 48 | 345 | 83 | 395 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 3.19e-19 | 132 | 310 | 42 | 197 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 9.02e-13 | 143 | 266 | 112 | 218 | Probable polygalacturonase At3g15720 |
| PLN03010 | PLN03010 | 2.64e-11 | 43 | 266 | 42 | 237 | polygalacturonase |
| PLN02218 | PLN02218 | 4.21e-11 | 50 | 423 | 70 | 422 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNL41164.1 | 0.0 | 1 | 436 | 1 | 436 |
| CBK68264.1 | 3.55e-315 | 1 | 436 | 1 | 436 |
| QRM98466.1 | 3.55e-315 | 1 | 436 | 1 | 436 |
| QUT32943.1 | 3.55e-315 | 1 | 436 | 1 | 436 |
| QDH54544.1 | 5.05e-315 | 1 | 436 | 1 | 436 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 1.36e-31 | 46 | 308 | 43 | 324 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 6.83e-23 | 36 | 376 | 16 | 378 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 4MXN_A | 1.04e-12 | 40 | 255 | 14 | 215 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
| 2UVE_A | 6.91e-10 | 50 | 303 | 159 | 444 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 4C2L_A | 1.08e-09 | 64 | 264 | 29 | 216 | Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 1.22e-24 | 37 | 266 | 52 | 279 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q949Z1 | 3.11e-19 | 45 | 353 | 77 | 369 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1 |
| P43212 | 1.24e-15 | 48 | 296 | 59 | 280 | Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1 |
| Q9FY19 | 3.82e-14 | 40 | 320 | 55 | 304 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
| P35339 | 1.56e-12 | 45 | 342 | 38 | 315 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000892 | 0.723641 | 0.274581 | 0.000269 | 0.000334 | 0.000278 |