CAZyme Information: MGYG000000013_01965

Basic Information

• Species: Bacteroides sp902362375
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
• CAZyme ID: MGYG000000013_01965
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
470	MGYG000000013_4|CGC6	53479.21	7.2865

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000013	6368149	Isolate	United Kingdom	Europe

• Gene Location: Start: 457854; End: 459266 Strand: -

Full Sequence      

MKNSIVILFLLLLSQLGYGQGHAFKVTARPWVKGQKDLPWKEYDTRTIAQLDGFKATDKV
HVNEYGSDLDAPRHRATGFFRVERIGNRWWMIDPDGYRHLQKVVVGVRLGTSERNKQAML
DKFGTEEKWIEGTAQLIHSLGFSGAGSWSNEEAIASYNASHKEVLTRSIILNLMSGYGKK
RGGTYQLPGNTGYPNQCIFVFDPEFETYCDEMAQKLVANKMDKNIIGYFSDNELPFGPKN
LEGYLTLQNPGDPGRVYAESWLKKQGITSQQITDEHREEFAGVVAERYCKVVSEAIRKYD
PNHLYLGSRLHGKPKFIRQIVEAAGRYCDVVAINYYGAWTPSEKTMKHWGEWAQKPFIIT
EFYTKGMDSGLANTTGAGFTVQTQQERGYAYQHFVLGLLESGNCVGWHWFRYQDNDPTAK
GADPSNLDSNKGLIDNEYNLYKPLADAMKELNINAYRLADWFDQQSNNNQ

Enzyme Prediction     

No EC number prediction in MGYG000000013_01965.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	116	456	1.5e-83	0.552833078101072

CDD Domains     

MGYG000000013_01965 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGT71934.1	0.0	1	470	1	470
QNL39156.1	0.0	1	469	1	469
SCV06348.1	0.0	1	470	2	471
ALJ46941.1	0.0	1	470	1	470
QRQ59048.1	0.0	1	470	1	470

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5T3B_A	6.81e-88	37	464	52	481	ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]
4BQ2_A	2.12e-28	48	456	233	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	5.11e-28	48	456	233	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A	7.74e-25	63	456	264	759	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5Z6P_A	2.55e-20	47	456	248	759	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	1.18e-23	65	458	476	951	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839	2.49e-14	119	456	547	913	Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000193	0.999227	0.000146	0.000144	0.000134	0.000126

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000013_01965.