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CAZyme Information: MGYG000000013_02633

You are here: Home > Sequence: MGYG000000013_02633

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp902362375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
CAZyme ID MGYG000000013_02633
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
470 MGYG000000013_6|CGC2 52943.31 5.7386
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000013 6368149 Isolate United Kingdom Europe
Gene Location Start: 122011;  End: 123423  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000013_02633.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 180 456 1.1e-43 0.7938461538461539

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.26e-14 218 401 239 421
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 2.56e-09 197 451 88 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
pfam13229 Beta_helix 2.14e-04 197 328 26 149
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
PLN02218 PLN02218 3.24e-04 265 462 242 423
polygalacturonase ADPG
PLN02793 PLN02793 0.001 219 383 229 396
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL37057.1 0.0 1 470 1 470
QDM08620.1 0.0 1 470 1 470
QUT28576.1 0.0 1 470 1 470
QUT82475.1 0.0 1 470 1 470
QDH55088.1 0.0 1 470 1 470

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DBR6 4.37e-07 206 449 240 456
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.042610 0.950784 0.004069 0.001396 0.000560 0.000554

TMHMM  Annotations      download full data without filtering help

start end
13 32