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CAZyme Information: MGYG000000013_02643

You are here: Home > Sequence: MGYG000000013_02643

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp902362375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
CAZyme ID MGYG000000013_02643
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
468 53065.23 5.6191
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000013 6368149 Isolate United Kingdom Europe
Gene Location Start: 139279;  End: 140685  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000013_02643.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 191 447 8.9e-42 0.7507692307692307

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.19e-13 222 382 246 400
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 2.33e-10 194 412 88 273
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 9.06e-07 223 412 186 364
Probable polygalacturonase
PLN03003 PLN03003 0.001 224 399 148 304
Probable polygalacturonase At3g15720
PLN03010 PLN03010 0.006 224 381 167 311
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRQ56356.1 0.0 1 468 1 468
ALJ44674.1 0.0 1 468 1 468
SCV09008.1 0.0 1 468 1 468
QNL37066.1 0.0 1 468 1 468
QGT69480.1 0.0 1 468 1 468

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DBR6 5.74e-07 199 445 241 456
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000455 0.998716 0.000262 0.000180 0.000182 0.000177

TMHMM  Annotations      download full data without filtering help

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