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CAZyme Information: MGYG000000013_03548

You are here: Home > Sequence: MGYG000000013_03548

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp902362375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902362375
CAZyme ID MGYG000000013_03548
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
373 MGYG000000013_9|CGC6 42888.02 8.3996
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000013 6368149 Isolate United Kingdom Europe
Gene Location Start: 131713;  End: 132834  Strand: -

Full Sequence      Download help

MKRRLFFVVT  LLAGWNLLSG  QSLPDRKETL  KTLVKVNDCF  MKKYADYTQP  SYVGKFRPSN60
IWTRGVYYEG  LMALHTIYPR  SDYYDYAYDW  ADFHKWGLRD  GNTTRNADDH  CCGQTYIELY120
KICPDPVKIK  NIKAAMDMLV  NTPQVDDWTW  IDAIQMGMPV  LAQLGKVTGE  QKYYDKMWQM180
YACSRNKIGK  GLFNEKEGLW  WRDANFVPPY  KEPNGKNCYW  SRGNGWVYTA  LVRVLNEIPM240
DEVHRADYKA  DFLAMSKALK  ACQRTDGFWN  VSLHDESNYG  GKETSGTTLF  IYGMAWGVRN300
GLLDKKEYMP  VIVKAWNAVV  KEAVRSNGSL  GYVQGSGKEP  KDSQPVTYKS  VPDFEDYGVG360
CFLLAGTEVY  KLD373

Enzyme Prediction      help

EC 3.2.1.172

CAZyme Signature Domains help

Created with Snap183755749311113014916718620522324226127929831733535457371GH105
Family Start End Evalue family coverage
GH105 57 371 1.5e-89 0.9698795180722891

CDD Domains      download full data without filtering help

Created with Snap183755749311113014916718620522324226127929831733535434372Glyco_hydro_8840372YesR
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 2.31e-107 34 372 3 342
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 1.50e-44 40 372 11 356
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap18375574931111301491671862052232422612792983173353541373QGT72529.1|GH1051373QRQ54634.1|GH1051373SCV07133.1|GH1051373ALJ47735.1|GH1051373QDO69334.1|GH105
Hit ID E-Value Query Start Query End Hit Start Hit End
QGT72529.1 1.79e-267 1 373 1 373
QRQ54634.1 5.02e-256 1 373 1 374
SCV07133.1 5.02e-256 1 373 1 374
ALJ47735.1 5.02e-256 1 373 1 374
QDO69334.1 5.13e-224 1 373 1 375

PDB Hits      download full data without filtering help

Created with Snap1837557493111130149167186205223242261279298317335354253684Q88_A603685NOA_A203724CE7_A1413723K11_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q88_A 8.22e-67 25 368 8 353
ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482]
5NOA_A 2.12e-66 60 368 54 370
PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron]
4CE7_A 3.13e-42 20 372 7 369
Crystalstructure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans],4CE7_B Crystal structure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans],4CE7_C Crystal structure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans]
3K11_A 1.52e-14 141 372 192 413
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Created with Snap183755749311113014916718620522324226127929831733535462373sp|T2KPL9|PLH33_FORAG1372sp|L7P9J4|UH105_NONUL46369sp|P9WF04|UH105_ALTSL
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KPL9 5.56e-48 62 373 58 376
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1
L7P9J4 3.75e-42 1 372 1 376
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1
P9WF04 3.06e-37 46 369 76 408
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_28 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000252 0.999131 0.000188 0.000150 0.000137 0.000127

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000013_03548.