logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000014_01089

You are here: Home > Sequence: MGYG000000014_01089

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium butyricum
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium butyricum
CAZyme ID MGYG000000014_01089
CAZy Family GH53
CAZyme Description Arabinogalactan endo-beta-1,4-galactanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
326 MGYG000000014_3|CGC3 37412.73 4.4026
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000014 4564499 Isolate United Kingdom Europe
Gene Location Start: 89938;  End: 90918  Strand: +

Full Sequence      Download help

MVNKKNDEET  YFAKGADIGW  LQQMEVTGYK  FYNDNGEEED  CFQILKDHGI  NSIRLRAWVN60
PSDDPQSGHC  STDEVVEMAV  RAKNMGFRLI  IDLHYSDSWA  DPEKQKKPAA  WENHSFEQLV120
LDVYNYTLEV  MNALKAKDVK  PEWVQIGNEI  PSGMLWPDGS  IDNFEQLSKL  LNSGYEAVKV180
IYNEAKVIIH  LDQGDDRERF  IKFFDNHKAN  GGKYDVIGVS  YYPYWIEKDY  TETIDNLSNN240
LIEFVSRYNK  EVMVCEVGGE  DTSVSNTYDM  LKEVIKIVKS  ISDNKGLGVF  YWEPEGAYNW300
SKYKLSAWGD  DGRPTAALDA  FLDSNS326

Enzyme Prediction      help

No EC number prediction in MGYG000000014_01089.

CAZyme Signature Domains help

Created with Snap16324865819711413014616317919521122824426027729330914306GH53
Family Start End Evalue family coverage
GH53 14 306 4.6e-109 0.9181286549707602

CDD Domains      download full data without filtering help

Created with Snap16324865819711413014616317919521122824426027729330913321Glyco_hydro_5312295GanB
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07745 Glyco_hydro_53 2.28e-127 13 321 1 333
Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1,4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold.
COG3867 GanB 2.49e-105 12 295 39 343
Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Created with Snap1632486581971141301461631791952112282442602772933091326ANF16398.1|GH531326ALS19254.1|GH531326ALR90819.1|GH531326QUF85710.1|GH531326QJU46812.1|GH53
Hit ID E-Value Query Start Query End Hit Start Hit End
ANF16398.1 7.87e-251 1 326 7 332
ALS19254.1 7.87e-251 1 326 7 332
ALR90819.1 7.87e-251 1 326 7 332
QUF85710.1 7.87e-251 1 326 7 332
QJU46812.1 7.87e-251 1 326 7 332

PDB Hits      download full data without filtering help

Created with Snap16324865819711413014616317919521122824426027729330983216GPA_A83216GP5_A123087OSK_A142941FHL_A142944BF7_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6GPA_A 5.44e-90 8 321 3 313
Beta-1,4-galactanasefrom Bacteroides thetaiotaomicron with galactose [Bacteroides thetaiotaomicron VPI-5482],6GPA_B Beta-1,4-galactanase from Bacteroides thetaiotaomicron with galactose [Bacteroides thetaiotaomicron VPI-5482]
6GP5_A 1.80e-89 8 321 39 349
Beta-1,4-galactanasefrom Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],6GP5_B Beta-1,4-galactanase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
7OSK_A 9.32e-64 12 308 50 364
ChainA, Arabinogalactan endo-1,4-beta-galactosidase [Ignisphaera aggregans DSM 17230],7OSK_B Chain B, Arabinogalactan endo-1,4-beta-galactosidase [Ignisphaera aggregans DSM 17230]
1FHL_A 1.63e-55 14 294 5 299
CrystalStructure Of Beta-1,4-galactanase From Aspergillus Aculeatus At 293k [Aspergillus aculeatus],1FOB_A Crystal Structure Of Beta-1,4-galactanase From Aspergillus Aculeatus At 100k [Aspergillus aculeatus],6Q3R_A ASPERGILLUS ACULEATUS GALACTANASE [Aspergillus aculeatus],6Q3R_B ASPERGILLUS ACULEATUS GALACTANASE [Aspergillus aculeatus]
4BF7_A 3.11e-53 14 294 22 315
Emericillanidulans endo-beta-1,4-galactanase [Aspergillus nidulans]

Swiss-Prot Hits      download full data without filtering help

Created with Snap1632486581971141301461631791952112282442602772933098310sp|P48843|YBAB_NIACI14294sp|Q9Y7F8|GANA_ASPTU14299sp|Q0CTQ7|GANA_ASPTN14294sp|A2RB93|GANA_ASPNC14294sp|Q8X168|GANA_ASPNG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48843 8.06e-68 8 310 2 329
Uncharacterized protein in bgaB 5'region (Fragment) OS=Niallia circulans OX=1397 PE=3 SV=1
Q9Y7F8 8.81e-56 14 294 21 315
Probable arabinogalactan endo-beta-1,4-galactanase A OS=Aspergillus tubingensis OX=5068 GN=galA PE=2 SV=1
Q0CTQ7 3.37e-55 14 299 19 319
Probable arabinogalactan endo-beta-1,4-galactanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=galA PE=3 SV=1
A2RB93 3.46e-55 14 294 21 315
Probable arabinogalactan endo-beta-1,4-galactanase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=galA PE=3 SV=1
Q8X168 4.87e-55 14 294 21 315
Arabinogalactan endo-beta-1,4-galactanase A OS=Aspergillus niger OX=5061 GN=galA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000014_01089.