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CAZyme Information: MGYG000000019_03176

You are here: Home > Sequence: MGYG000000019_03176

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Enterobacter cloacae_O
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae_O
CAZyme ID MGYG000000019_03176
CAZy Family GH0
CAZyme Description HTH-type transcriptional activator RhaR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
784 MGYG000000019_14|CGC2 90714.81 8.2699
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000019 4947669 Isolate United Kingdom Europe
Gene Location Start: 63876;  End: 66230  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000019_03176.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3664 XynB 5.14e-28 419 771 83 428
Beta-xylosidase [Carbohydrate transport and metabolism].
smart00342 HTH_ARAC 4.68e-24 180 263 1 84
helix_turn_helix, arabinose operon control protein.
COG2207 AraC 8.69e-24 151 270 7 126
AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
COG4977 GlxA 3.33e-21 126 270 181 326
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].
pfam12833 HTH_18 1.60e-17 186 265 1 81
Helix-turn-helix domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QLA69428.1 0.0 1 784 1 784
QKZ97966.1 0.0 1 783 1 783
QMV77404.1 0.0 1 784 1 784
QHI56550.1 0.0 1 784 1 784
QIF28004.1 0.0 1 784 1 784

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SWI_A 8.18e-13 181 266 23 108
TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]
1D5Y_A 6.59e-06 181 265 20 104
CrystalStructure Of The E. Coli Rob Transcription Factor In Complex With Dna [Escherichia coli],1D5Y_B Crystal Structure Of The E. Coli Rob Transcription Factor In Complex With Dna [Escherichia coli],1D5Y_C Crystal Structure Of The E. Coli Rob Transcription Factor In Complex With Dna [Escherichia coli],1D5Y_D Crystal Structure Of The E. Coli Rob Transcription Factor In Complex With Dna [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NYT6 2.09e-36 26 766 23 738
Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q6GD21 2.09e-36 26 766 23 738
Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1
Q7A882 8.79e-36 26 766 23 738
Uncharacterized HTH-type transcriptional regulator SA0097 OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0097 PE=4 SV=1
Q99XB1 8.79e-36 26 766 23 738
Uncharacterized HTH-type transcriptional regulator SAV0101 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0101 PE=4 SV=1
Q5HJR8 8.79e-36 24 766 21 738
Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000085 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000019_03176.