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CAZyme Information: MGYG000000021_01835

You are here: Home > Sequence: MGYG000000021_01835

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Limosilactobacillus vaginalis_A
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus; Limosilactobacillus vaginalis_A
CAZyme ID MGYG000000021_01835
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1281 139162.71 10.2908
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000021 1945993 Isolate United Kingdom Europe
Gene Location Start: 10828;  End: 14673  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000021_01835.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd13402 LT_TF-like 2.72e-25 1092 1202 1 112
lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
COG5283 COG5283 8.84e-14 1 894 62 1040
Phage-related tail protein [Mobilome: prophages, transposons].
COG3953 SLT 2.30e-10 1095 1188 18 120
SLT domain protein [Mobilome: prophages, transposons].
TIGR02675 tape_meas_nterm 4.12e-06 260 332 3 75
tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
COG5412 COG5412 2.48e-05 373 877 37 481
Phage-related protein [Mobilome: prophages, transposons].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QLL69601.1 2.40e-244 86 1278 118 1216
QIZ04293.1 1.18e-210 1 1280 1 1215
QPB66446.1 1.13e-190 1 1281 1 1213
QBE45498.1 1.13e-190 1 1281 1 1213
AKP01087.1 1.13e-190 1 1281 1 1213

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000039 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
499 521
534 556
576 593
657 676