CAZyme Information: MGYG000000021_01860

Basic Information

• Species: Limosilactobacillus vaginalis_A
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus; Limosilactobacillus vaginalis_A
• CAZyme ID: MGYG000000021_01860
• CAZy Family: GH23
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1446		155460.95	10.4359

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000021	1945993	Isolate	United Kingdom	Europe

• Gene Location: Start: 10408; End: 14748 Strand: +

Full Sequence      

MSADGTVNIDVKLDAQQPTQTAKDLDNLLKDIGKDTGKEAEKSINENLNKSVDKTKEARK
KMDSELDKPIKQKVDADTSEATEKIRLFKHEFEIIPHEVRTKLIADAKKNGIDNFSKLLR
KIPKEQRTELIAKAQKGEAINYEELLRKIPARVITEAKLNDHASLPLRQLQTEAKETSHS
FSRLKDVMAGTFLGGMAIQGLNGIKNGLIASAKAGMQFNVEQDRMRTVWSALTTEAPRDG
KVLVNYINDMAQHSIYAASTIDRMAQSFYHVHSSVKETKDWTNGFIRLGSTLHMTNDQLA
EAGEQFAKIVAGGKANAEDMSVMINRFPMFGEALQKATGKSMKQLYEMSAQGKLTAKDFT
EALDYLSNKYKGSTEEAMTSFTGMSMYIKSRWQMLWGEVTSQGFKGSKKLSEDMRDILSD
KMIAKYASLLSEALGAILKGVMAVLDYVGNHKDTIVDVIGNLGKIVGLIGGTIWQVFADI
IKMIATMFGLTSDKSKGAHGALEDFDNILKAILDHQGAVKAFTVIFMALFATKKIYDSID
ALTTFYGILKDIIGLKGIGGVMKGIGAGARGETLATSAEEVATGGLKATHATKIGRLVGR
GTDHLFGITKARQAVSGPASVMENGAGKAAIRASERGIIRRTASRIPVVGSLIAGGTELI
GINKQNRNEKIGRAAGATGGTAAGGVAGAWIGGALGSIVPGAGTAVGAGVGSLIGSTVGG
MFGAKGGGAIGKNISKWKSGAEKAMSSLGKTLSGKAKEIGKTVGKAFQSIAKPIGKIWSG
ITKPIVRVFNTLKKTLGTIIKGIGLVVIAPFVLMVGAIIKAWQKLSKPIGRVVKAIGKTL
EAGWKKISKATSKAWQGITKVVTKAFDRIKKPIQRAMKVTGKVIQSAWNTISKTTSKVWR
SLSRTVLKAVNALYKPISRIFNAISRVVGRVWNGVSKSTGNTWREVERVINRVLGGVWKF
VKDKFDDMKDAIDDAMNGIKHIWDSIWDAISDKVSAVWDTIKGVVSDGINAIGGFWNTGA
GGLEKVAGFFGAKVSIPRMKKLANGTGGRQGEHLLAMVNDQEGPMYREAIFRNNGRIEIP
TARNVLTHLQPGEAIMPAKETAKMFGIPRFEGGFGDWFGKALNYASSKIGNLADMIEDKL
DALDDALKDPLGTLVNIYTHGTNTAKVMWHDIADNGARDKIPHYAKNWFTNLLQKAEEKL
EAVESGPLTGDHRALMRRAGIPASWFDAINFIVTHESGWRVNATNPSSGAYGLPQALPGS
KMASAGSDWRTNPVTQLKWMKGYVGRYGGGPGAATFWKSHHWYANGGWADKFSIFGEVPG
EPELAVNPARDSSEGHIAEAIEARAKINPNGFAGTLSKLIESAKNSANNLVPVINQGTNQ
VRTASSVASRSAKIDGNLNVVMNVDGKTIGHVTYATWRAIRSHEINIQANGGAIPVGGAQ
PLGGVY

Enzyme Prediction     

No EC number prediction in MGYG000000021_01860.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5283	COG5283	2.96e-17	155	1152	199	1136	Phage-related tail protein [Mobilome: prophages, transposons].
COG5412	COG5412	4.16e-07	512	1028	29	488	Phage-related protein [Mobilome: prophages, transposons].
TIGR02675	tape_meas_nterm	5.25e-07	283	359	3	75	tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
COG5412	COG5412	9.43e-07	798	1064	226	504	Phage-related protein [Mobilome: prophages, transposons].
cd13925	RPF	1.90e-06	1230	1286	4	65	core lysozyme-like domain of resuscitation-promoting factor proteins. Resuscitation-promoting factor (RPF) proteins, found in various (G+C)-rich Gram-positive bacteria, act to reactivate cultures from stationary phase. This protein shares elements of the structural core of lysozyme and related proteins. Furthermore, it shares a conserved active site glutamate which is required for activity, and has a polysaccharide binding cleft that corresponds to the peptidoglycan binding cleft of lysozyme. Muralytic activity of Rpf in Micrococcus luteus correlates with resuscitation, supporting a mechanism dependent on cleavage of peptidoglycan by RPF.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AMS07431.1	0.0	3	1446	2	1457
QDK49457.1	0.0	71	1446	42	1432
QLL78140.1	2.97e-258	3	1426	2	1490
APU45393.1	3.44e-171	3	1444	2	1440
AVK60256.1	1.09e-146	73	1434	49	1595

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000062	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

start	end
646	663
676	698
702	724
797	819