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CAZyme Information: MGYG000000024_02208

You are here: Home > Sequence: MGYG000000024_02208

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paraclostridium bifermentans
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Paraclostridium; Paraclostridium bifermentans
CAZyme ID MGYG000000024_02208
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
423 MGYG000000024_2|CGC1 46901.27 5.4767
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000024 3641600 Isolate United Kingdom Europe
Gene Location Start: 45547;  End: 46818  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000024_02208.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 1.06e-12 345 406 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 8.97e-08 256 408 32 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 5.35e-07 293 406 1 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CEK39509.1 6.87e-279 1 423 1 423
CEJ75061.1 2.29e-277 1 423 1 423
QYE97751.1 9.34e-277 1 423 1 423
AUN15650.1 6.29e-275 1 423 1 423
AVB66705.1 3.17e-238 1 423 1 423

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000029 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000024_02208.