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CAZyme Information: MGYG000000025_00010

You are here: Home > Sequence: MGYG000000025_00010

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus nepalensis
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus nepalensis
CAZyme ID MGYG000000025_00010
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
258 MGYG000000025_1|CGC1 29432.52 7.0762
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000025 2822370 Isolate United Kingdom Europe
Gene Location Start: 7972;  End: 8748  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000025_00010.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 114 240 6.4e-24 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 6.91e-88 28 257 15 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 1.52e-31 102 246 1 144
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 1.15e-12 114 211 1 87
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG1705 FlgJ 2.28e-05 114 201 51 142
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATH64536.1 1.33e-177 1 258 1 258
ATH59444.1 1.33e-177 1 258 1 258
AWI43893.1 1.33e-177 1 258 1 258
AYX90524.1 5.20e-159 1 258 1 258
QKU18577.1 6.06e-158 1 258 1 258

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4PI7_A 7.14e-100 39 257 9 227
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 5.82e-99 39 257 9 227
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6FXP_A 5.76e-51 40 245 21 233
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 1.34e-50 40 245 51 263
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXO_A 2.16e-48 61 246 35 232
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O33635 6.00e-45 95 246 1164 1323
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 6.00e-45 95 246 1164 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q8CPQ1 6.00e-45 95 246 1164 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q931U5 9.47e-44 61 246 1039 1236
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
Q99V41 9.47e-44 61 246 1039 1236
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.902506 0.087895 0.001782 0.000403 0.000255 0.007176

TMHMM  Annotations      download full data without filtering help

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