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CAZyme Information: MGYG000000029_00146

You are here: Home > Sequence: MGYG000000029_00146

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides finegoldii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides finegoldii
CAZyme ID MGYG000000029_00146
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
474 53930.55 6.5012
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000029 4415875 Isolate United Kingdom Europe
Gene Location Start: 194169;  End: 195593  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000029_00146.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 200 455 1.1e-41 0.7476923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 4.17e-12 228 466 246 470
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.11e-08 203 421 91 276
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 2.46e-05 229 386 186 330
Probable polygalacturonase
PLN02218 PLN02218 4.01e-04 228 464 200 423
polygalacturonase ADPG
PLN03003 PLN03003 0.001 230 423 148 332
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU95271.1 0.0 26 474 19 467
QRQ56356.1 2.39e-308 18 474 12 468
ALJ44674.1 2.39e-308 18 474 12 468
SCV09008.1 2.39e-308 18 474 12 468
QNL37066.1 2.78e-307 18 474 12 468

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A2QW66 3.92e-06 191 431 162 389
Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxA PE=3 SV=1
Q27UB2 3.92e-06 191 431 162 389
Exopolygalacturonase A OS=Aspergillus niger OX=5061 GN=pgxA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002618 0.992414 0.004269 0.000239 0.000224 0.000222

TMHMM  Annotations      download full data without filtering help

start end
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