CAZyme Information: MGYG000000029_01254

Basic Information

• Species: Bacteroides finegoldii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides finegoldii
• CAZyme ID: MGYG000000029_01254
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
834		96497.42	8.1268

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000029	4415875	Isolate	United Kingdom	Europe

• Gene Location: Start: 273637; End: 276141 Strand: -

Full Sequence      

MTIWGFTVFCSLFSVLTLGAREYSPACIHENMRQTPYPQEYHRPYLNPVPLLVPQQMKQA
DFLQFALSKEKDFSGNTTVVSKPVPWCMFNPHQILSSGTWYWRFRSVSKSGENMAWSPTY
SFTITGDIPQFVTPSFEVVRKKIVGNSPRLYCFLEDDLKKSRSKIYTHPEYNLMVTSRRE
GLAANYATDTFVSNHVSAMVVQCEKLHTAYTLLQRDVYADKMAQLVRWLLPSPVTDRQIE
NDFYAGDLAYLLACTYETCYDRFSVKEREQMEQLMERIIKFYKRRFFGGTENHIFDNHLW
QFTFRRLLQTSLVLYEKSPEAREFFEYAYELWTCRAPATGFNRDGIWMNGTCYFSANAVS
LYYIPSLFSYLADTDFLQHPWYREVGKAMVYSWPPLSRSVGFGDGHEQMNDKPLVIRSAF
AEFLARETGDPYSAWYTSIDKRYEMDDEMRLYRMVRSESKKPIAALPADEPKAVWFRDTG
EMIANSSMKDYRNNLCLSFHSSPFGSGSHTHSAQNAFNLHYRGVPVYGSTGYYMNFSDAH
NLLSYRHTRAHNTLLIDGIGQPFTTRAYGNIVRAFSGEHISYALGDASNAYCGISEYPMW
VTNFAKQHLEQSVENGFGETPLTLYRRHIFLLHPDKIVIYDEMEAKKPVRWDWLLHSPVK
FSIDEQTCKLVTRNEEKQFTSVAQLFSRQDCKITQTDRFVVPPNQENAVRGEVFTNSWHL
TASFTPGKRNRILTIIQVQPDGKQAVGIQRDGNLFQCGDWTIEAELDVKKPASLYITNKN
NQAVFGYGKSSLLINGKSYRPIDKTASLLFDKIDGSWQMQERMDRKPQLTGSNR

Enzyme Prediction     

No EC number prediction in MGYG000000029_01254.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	487	643	5.5e-49	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	1.96e-72	28	436	3	444	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	3.64e-09	471	656	4	165	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49807.1	0.0	13	831	11	831
QUT44273.1	0.0	51	831	1	783
QUT44689.1	0.0	28	831	18	824
QRQ48971.1	0.0	28	831	18	824
QRQ50362.1	2.08e-272	29	830	20	821

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	5.73e-114	44	828	63	865	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	3.26e-111	44	828	63	865	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	5.09e-34	67	657	57	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	8.56e-33	67	657	57	661	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000376	0.999008	0.000161	0.000148	0.000140	0.000137

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000029_01254.