logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000029_02058

You are here: Home > Sequence: MGYG000000029_02058

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides finegoldii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides finegoldii
CAZyme ID MGYG000000029_02058
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
527 MGYG000000029_9|CGC5 59890.1 5.5187
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000029 4415875 Isolate United Kingdom Europe
Gene Location Start: 201294;  End: 202877  Strand: +

Full Sequence      Download help

MKSKVFLASL  GFFYMSMVGG  CSQPATDVSY  QLETDRPCQT  MTYFGASDAW  SMQFIGLWPE60
EKQNQIADWL  FSTENDANGQ  PKGIGLSLWR  FNVGAGSAEQ  GDDSQIASPW  MRAECFLQPD120
GTYNWSKQQG  QRNFLKLAKE  RGVDKFLAFL  NSPPVYYTQN  GLATNTGRGG  TANLKPDCYE180
KYVRFLADVV  QGVEQHDGIK  FNYICPFNEP  DGHWNWVGPK  QEGCPATNRE  IARTVRLLSR240
EFVNRNIDTQ  ILVSESSDYR  CMFRTHETDW  QRGYQIQAFF  CPDSVDTYLG  DTPNVPRLML300
GHSYWTTTPL  SELRNIRSQL  RDTLDKHNVD  FWQTETCIMG  NDEEIGGGNG  FDRTMKTALY360
VARIIHHDIV  YAGAKSWQWW  RAIGGDYKDG  LIREYTTDDN  FLDGRVEDSK  LMWALGNYSR420
FIRPGAVRLS  VSAFDQTNTF  IPDGDTDQQG  LMCSAYKNVD  GTYVIVVINY  ANEEKEFSIH480
KEKVGNAQWQ  VYRTSDKEGE  NLLPVGKVKS  GKIVHIPARS  IITLQSN527

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Created with Snap26527910513115818421023726328931634236839542144747450030524GH30
Family Start End Evalue family coverage
GH30 30 524 1.3e-197 0.9917355371900827

CDD Domains      download full data without filtering help

Created with Snap26527910513115818421023726328931634236839542144747450039392Glyco_hydr_30_239524XynC425524Glyco_hydro_30C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 5.17e-145 39 392 13 366
O-Glycosyl hydrolase family 30.
COG5520 XynC 3.88e-14 39 524 45 426
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189 Glyco_hydro_30C 1.43e-06 425 524 1 63
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Created with Snap2652791051311581842102372632893163423683954214474745001526ALJ47685.1|GH30_41526QRQ59078.1|GH30_41526SCV07083.1|GH30_47527QNL39884.1|GH30_41525QUR46757.1|GH30_4
Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ47685.1 0.0 1 526 4 530
QRQ59078.1 0.0 1 526 1 527
SCV07083.1 0.0 1 526 4 530
QNL39884.1 0.0 7 527 10 530
QUR46757.1 0.0 1 525 1 526

PDB Hits      download full data without filtering help

Created with Snap265279105131158184210237263289316342368395421447474500395243CLW_A1244954CKQ_A1454951NOF_A1244954UQA_A235247NCX_AAA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 9.49e-88 39 524 17 494
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
4CKQ_A 2.32e-11 124 495 81 378
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
1NOF_A 3.66e-11 145 495 77 349
ChainA, xylanase [Dickeya chrysanthemi],2Y24_A Chain A, XYLANASE [Dickeya chrysanthemi]
4UQA_A 5.44e-11 124 495 81 378
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
7NCX_AAA 6.74e-11 23 524 7 452
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]

Swiss-Prot Hits      download full data without filtering help

Created with Snap26527910513115818421023726328931634236839542144747450023524sp|G2Q1N4|XY30A_MYCTT124523sp|Q6YK37|XYNC_BACIU124527sp|Q45070|XYNC_BACSU
Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 3.83e-11 23 524 24 469
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
Q6YK37 1.56e-07 124 523 94 418
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2
Q45070 2.07e-07 124 527 93 421
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000013 1.000039 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000029_02058.