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CAZyme Information: MGYG000000029_03057

You are here: Home > Sequence: MGYG000000029_03057

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides finegoldii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides finegoldii
CAZyme ID MGYG000000029_03057
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
513 MGYG000000029_19|CGC3 57159.33 8.1593
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000029 4415875 Isolate United Kingdom Europe
Gene Location Start: 75498;  End: 77039  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000029_03057.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 48 419 1.8e-94 0.916923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.21e-89 22 461 83 531
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 8.12e-37 113 393 48 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 3.27e-26 21 417 67 409
polygalacturonase ADPG
PLN02793 PLN02793 4.16e-22 101 421 128 399
Probable polygalacturonase
PLN02188 PLN02188 1.33e-20 21 463 36 400
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDM11326.1 0.0 1 508 1 508
QUT78461.1 0.0 1 508 1 508
QGT73192.1 0.0 1 508 1 508
QRQ55309.1 0.0 1 508 1 508
ALJ48472.1 0.0 1 508 1 508

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 1.94e-79 20 425 26 420
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 2.06e-65 20 440 43 451
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 1.06e-31 23 453 158 599
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A 3.16e-21 38 419 22 364
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
4MXN_A 5.47e-13 20 296 20 240
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 7.60e-52 14 431 55 441
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644 1.98e-31 196 401 30 241
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P15922 6.69e-29 20 456 150 596
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P18192 2.07e-24 6 428 14 399
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
Q8RY29 5.36e-24 21 417 67 409
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000331 0.054214 0.945345 0.000042 0.000054 0.000046

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000029_03057.