CAZyme Information: MGYG000000033_01477

Basic Information

• Species: CAG-41 sp900066215
• Lineage: Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; CAG-41; CAG-41 sp900066215
• CAZyme ID: MGYG000000033_01477
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
772	MGYG000000033_10|CGC1	88787.25	5.0574

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000033	3010191	Isolate	United Kingdom	Europe

• Gene Location: Start: 16347; End: 18665 Strand: -

Full Sequence      

MILSDKFVCEDRERSTYFKHVAAPIFRKSFTVPEHIKRAEISICGIGFYDLFVNGRKITK
GYLAPYISNPDHITYYDLYDIKPYLQNGENVIGIILGDGFGNSKTCVWDFDKNVFNASPK
LAFFAEIESFDKTEYYDASDFKCKKGAITFNDLRSGVFYDSRLEEKGWNEAGFIEDDKWH
SPVLADRPRGKAKICEAEPIRVIKEIKAVRIYKGELATYSPREDVCSWLEGKETQETPPT
RTGGYVYDFGENNAGIFRLKIRGRAGQRIDIQCTEYLDGDKPDYGNFNFYPDGYVQRDIY
ILHSDEEEIFEPMFTYHGFRYIYISGITEEQADDDLLTYLVMSSDLEETGGFECSDDIAN
KIFEIARRSDRANFYYFPTDCPHREKNGWTGDASVSSEHMIMTMNTEKSWREWLNNIRLA
QHPDGSIPGIVPTDTWGYEWGNGPIWDSVLFNLPYMLYKYRGNMDIVKENAHAMMSYLEY
ICRQRDEEGIIEIGLGDLGPVCRNSDDYIVPLGFTDSVCVLDTCRKSEKMFRAAGLNHNA
DFAKNLGDELYFAVRKKYLNTDTMTIKSRCQTAQAMGIYFDIFTAAEKQFAFGQLMKILK
SDNYKLTCGLLGTRVIFHVLARFGEAETAYKMITDEEFPSYGYYVKQGATTLPEHFVLGD
MSREKSYNHHFLGDVIQWFIRYVGGINVKSSKNVLIRPMFIEGLNFARAYHNLPSGKVSV
EWQRNGDSIELKVKCPPETECEIELPDGYHFEDNGYNYSAQDITAVRTIKKI

Enzyme Prediction     

No EC number prediction in MGYG000000033_01477.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	240	745	3.4e-123	0.9920634920634921
CBM67	19	184	1.1e-23	0.8806818181818182

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	7.92e-75	347	683	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	4.37e-39	36	204	3	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	3.51e-21	235	341	1	101	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	1.33e-10	692	748	10	66	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGQ94103.1	3.47e-133	19	772	139	869
BBK91320.1	1.48e-128	23	747	145	849
QJE27359.1	4.80e-128	23	747	138	842
QIX67103.1	9.45e-128	23	747	138	842
QUT54420.1	9.94e-128	23	747	140	844

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	1.34e-97	23	746	176	899	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	4.40e-77	13	746	120	847	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
3W5M_A	6.72e-70	22	746	301	995	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KPL4	7.19e-80	22	745	183	906	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
Q82PP4	3.30e-69	22	746	301	995	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	4.43e-62	27	746	178	879	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	1.45e-59	27	749	174	882	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000055	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000033_01477.