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CAZyme Information: MGYG000000033_02560

You are here: Home > Sequence: MGYG000000033_02560

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-41 sp900066215
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; CAG-41; CAG-41 sp900066215
CAZyme ID MGYG000000033_02560
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
548 62436.9 5.0888
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000033 3010191 Isolate United Kingdom Europe
Gene Location Start: 13197;  End: 14843  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000033_02560.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 13 240 2.6e-39 0.6492307692307693

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.87e-13 13 284 238 498
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 4.64e-09 11 288 155 409
polygalacturonase
pfam00295 Glyco_hydro_28 7.25e-08 10 238 82 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 2.86e-04 21 201 185 365
Probable polygalacturonase
PLN03003 PLN03003 0.001 20 95 145 221
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ93866.1 9.79e-179 1 545 165 716
BCJ98361.1 8.28e-171 1 544 165 715
QIU92674.1 3.23e-40 13 242 246 467
ACI19833.1 2.80e-36 16 261 233 484
ANW95387.1 5.48e-36 22 200 250 427

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000091 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000033_02560.