CAZyme Information: MGYG000000034_01386

Basic Information

• Species: Massilimaliae timonensis
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilimaliae; Massilimaliae timonensis
• CAZyme ID: MGYG000000034_01386
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YteR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
366	MGYG000000034_2|CGC4	42150.84	4.5512

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000034	2753532	Isolate	United Kingdom	Europe

• Gene Location: Start: 447035; End: 448135 Strand: -

Full Sequence      

MRCKYAEKLADTLMKRYPKADQYPYKSWTYPQGFMLWGMARLWQKNGEQKYYDYIMEYVN
GHINADGKIPKFTGNSMDDMMAGSIIVWAYQQTKEPCFKKACEQIREAFCDYPRNNNGGF
WHGKDLPYEMWVDGVFMGQMFLSKYGAYLASSTEAEGCFDEAVRQLGIIYDCCSKEGTGL
IYHAWCQDKKASWADPVTGRSPEIWSEGLGWYALIIIEVLDILPEGHPQYQKIARQYLEL
MESLKETQDPSSGLWYQVVDKQDKEGNWCDTSGSAMFLYSMQKGIEIGMLDPSTYHEVIR
KGYLGLISKMQEDENGLLDIYDACEGLCVQNSYDDYVNYPKTVNAQEAVAACLWAIVEIE
YAEKEK

Enzyme Prediction     

No EC number prediction in MGYG000000034_01386.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	23	360	8.4e-88	0.9728915662650602

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG4225	YesR	7.96e-76	5	363	11	357	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470	Glyco_hydro_88	6.56e-70	5	360	1	340	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMW80470.1	2.80e-146	5	361	6	359
QIB56756.1	2.80e-146	5	361	6	359
AWI10254.1	2.42e-105	5	360	44	406
QDO71120.1	1.81e-94	9	366	83	435
ALJ58448.1	2.04e-93	9	366	83	435

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1NC5_A	1.73e-80	5	360	16	365	Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	7.22e-80	5	360	6	355	ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
4WU0_A	5.35e-59	4	360	3	359	StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
3K11_A	4.40e-15	117	358	186	409	Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
5NOA_A	9.52e-11	128	316	155	336	PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34559	9.46e-80	5	360	16	365	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6	2.84e-19	137	317	1	178	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7	2.84e-19	137	317	1	178	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000073	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000034_01386.