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CAZyme Information: MGYG000000039_01763

You are here: Home > Sequence: MGYG000000039_01763

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Faecalibacterium prausnitzii_H
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Faecalibacterium; Faecalibacterium prausnitzii_H
CAZyme ID MGYG000000039_01763
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
518 MGYG000000039_9|CGC3 57363.05 5.0699
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000039 2848022 Isolate United Kingdom Europe
Gene Location Start: 88784;  End: 90340  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000039_01763.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 106 475 1.8e-70 0.9292307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 4.63e-90 82 501 83 532
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 4.47e-26 172 395 41 250
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 3.64e-19 82 459 68 408
polygalacturonase ADPG
PLN03010 PLN03010 9.74e-18 86 395 51 320
polygalacturonase
PLN02188 PLN02188 4.11e-16 79 413 34 331
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP00558.1 0.0 1 518 1 518
QIA43717.1 0.0 1 518 1 518
AXA82452.1 0.0 1 518 1 518
CBK99742.1 0.0 1 518 1 518
CBL00656.1 0.0 1 518 1 518

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 5.01e-36 87 459 33 410
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 2.61e-28 87 459 50 425
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 1.25e-24 18 428 83 531
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A 1.33e-21 89 462 18 364
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
4C2L_A 2.52e-08 92 400 26 309
Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 1.78e-51 223 474 23 276
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
A7PZL3 2.92e-46 87 466 68 431
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 2.09e-24 52 428 115 524
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P18192 1.61e-21 89 462 44 390
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
P26509 9.61e-21 89 462 44 390
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000039_01763.