CAZyme Information: MGYG000000041_01614

Basic Information

• Species: Acetatifactor sp900066365
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Acetatifactor; Acetatifactor sp900066365
• CAZyme ID: MGYG000000041_01614
• CAZy Family: GH28
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
666	MGYG000000041_10|CGC3	74697.31	4.4485

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000041	3646137	Isolate	United Kingdom	Europe

• Gene Location: Start: 86083; End: 88083 Strand: -

Full Sequence      

MRKMIATWLGICMMFICSITVTAKTLTSDNMPENLPQKYHSMQYSVLADGQEVGVYNVGN
NAWGQEVSNCQLISDKSVKLTIDTAFNFSEFTVLPRTANASYTQNGRSIEVILQSPQNIT
LIFDNNFQGKALHIFLQKPETEIPEETDSDVLYFGPGYYDYSGQSPLKIESGKTLYLAEG
AVLRGRVAVLSASDVTICGQGILLNDFTSNDEYDSVALAIKNSSNVKIKDITVLRCEKSW
SAFMWKSDNVSVENVKIINPQYASSDGFDIANSHDVIFDNMFIRSCDDSIAIKGTGNNGY
NPAEDPAQSPANYNITIQNTQVWSDANNALGIGAETDAAYYDNITFKNIDVLYNYDDYSY
PDQLMERSALNICALNATNISNVTYEDIRIEKAKRLISITMPDSFWFGSLQGNWNWNGKI
SGITYRNIVSYSDGNNEIQMLGRGTEHMISGVTFDNVVIKGQKLGLSSRLLKINKYTKNV
QNIVNGSLTEIQDGPFGSNVHKIAEEYSQSQQGINEWYYRTWTNGVGNADMNWNSDGSGH
WRGVHSYDAIWMYDGILYLHPDTNQTMLEWKASQKGNIQITGNVRKYDILGGDGVVVSIW
KNDTLIWPESGWTAIGYNDNVGLKHDIEVDVEQGDIISFRVDEGMNNAYDTTIWTPVITY
NFYREY

Enzyme Prediction     

No EC number prediction in MGYG000000041_01614.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	191	470	6.4e-40	0.7384615384615385

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5434	Pgu1	5.17e-10	199	349	223	359	Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295	Glyco_hydro_28	7.17e-06	186	463	52	307	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010	PLN03010	0.002	217	389	159	345	polygalacturonase
PLN02793	PLN02793	0.003	217	294	179	256	Probable polygalacturonase

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMV67078.1	3.64e-211	26	660	44	663
QNK57052.1	1.73e-175	23	660	32	647
AZS17008.1	1.17e-147	32	481	63	508
QTH41143.1	1.25e-147	21	480	31	488
QJD84920.1	1.06e-145	32	481	40	487

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000530	0.996937	0.001958	0.000209	0.000175	0.000170

TMHMM  Annotations     

start	end
5	27