CAZyme Information: MGYG000000042_02392

Basic Information

• Species: Phocaeicola sp900066445
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900066445
• CAZyme ID: MGYG000000042_02392
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
837	MGYG000000042_14|CGC2	97028.06	7.4432

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000042	3613218	Isolate	United Kingdom	Europe

• Gene Location: Start: 62111; End: 64624 Strand: +

Full Sequence      

MNNKLKKLLFTFLILFLSIVDVNSILRYNYIHENVRTVPYPQKGVTLYINPCALFVPLSM
KKEENIQFALSCDNKFSDNATIYSEIRPWCMFNPHQVLKPGIWYWRFRNVSAEGKFSEWS
ETYSFEITDDIPEFVTPSFDVFLSNVPKKGNRIYCFLSDKIENARKDIYKHPEYNDMISQ
ARQGIAANYTFDVNPYNKLSEMSELAVKLQTAYILMDRQVYADKMVQFARRLLSVEFEES
RLANDFFAGDLAFFMANVYETCYSILTVEERTKIKELVINVFEYYRNLMYGHEENHVFNN
HFWQFPVRKFIQAALVFHDKDPLAKEILEYLYEIWTCKAPAANLNRDGNWHNGTSYFSAN
AVTLSYMASLFSYLTGVDFLKHPWYRNAGKGLVYSWPPESLSAGFGDGHEKTNDQPLRIR
SAFADFLARETGDPYASWYSSINQLYKTDYELRLYRMLSGKSRPVNNSLPSDVSKSVWFK
DSGEMIYIDSLSDYKHGMYLSFRSSPFGSGSHTHSNQNAFNIHYNGIPVYRSSGYYMNFS
DAHNIMSYRHTRAHNTILVDGIGQPFTTRAYGQITRMLKGEHITYALGDASNAYCGVSEY
PMWNENFSKVGIEQTPENGFGETPLTKFFRHVIVLDKDIVVLYDEMEAKKNVRWDWLLHS
PVRFNINDNTLVTHNEEGGFTATAYIISEQSCIYSQTNDFTEQPDENLAVRGERLEKYWH
LKATFHPSKYNRILTVIIIDQDGKEKRKIVRCHKSGGIQVGGWNISAELNVSKPASIIIT
DGKSKFGYGKKSIEIEPRKIYKLKDKNASVLYDCIDGEWKTEEMTDRRLKPTCVIIK

Enzyme Prediction     

No EC number prediction in MGYG000000042_02392.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	490	646	8.5e-49	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	6.86e-76	31	461	3	476	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	1.43e-09	498	663	22	169	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49807.1	0.0	31	832	26	830
QUT44273.1	0.0	54	832	1	782
QUT44689.1	3.89e-304	31	830	18	821
QRQ48971.1	1.57e-303	31	830	18	821
QIU94214.1	4.39e-244	33	827	46	840

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	1.47e-106	35	831	37	866	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	8.04e-104	35	831	37	866	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.28e-29	70	738	57	735	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.11e-28	70	738	57	735	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000322	0.999056	0.000157	0.000153	0.000138	0.000138

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000042_02392.