logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000043_00124

You are here: Home > Sequence: MGYG000000043_00124

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900066455
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900066455
CAZyme ID MGYG000000043_00124
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
860 MGYG000000043_1|CGC6 95937.93 6.1561
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000043 4183533 Isolate United Kingdom Europe
Gene Location Start: 168144;  End: 170726  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 54 298 1.3e-70 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 1.90e-133 47 849 92 756
beta-glucosidase BglX.
PLN03080 PLN03080 1.96e-116 15 817 32 742
Probable beta-xylosidase; Provisional
COG1472 BglX 1.06e-77 56 422 57 394
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 2.30e-51 369 741 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 9.18e-51 47 329 54 316
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ59552.1 0.0 10 860 13 863
QUT89412.1 0.0 10 860 13 863
QDO67959.1 0.0 10 860 12 862
QUT45300.1 0.0 6 860 8 862
QRQ49583.1 0.0 6 860 8 862

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 3.21e-90 11 848 1 722
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 3.21e-90 11 848 1 722
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5Z87_A 7.40e-86 56 859 120 784
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
6R5I_A 6.56e-84 76 857 83 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A 3.35e-83 76 857 83 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 1.39e-302 20 859 24 861
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q9SGZ5 1.50e-95 20 817 38 730
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
T2KMH0 7.73e-95 5 860 4 723
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q56078 1.04e-94 8 847 54 754
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 5.47e-92 8 847 54 754
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000349 0.997821 0.001306 0.000171 0.000155 0.000149

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000043_00124.