CAZyme Information: MGYG000000043_00168

Basic Information

• Species: Phocaeicola sp900066455
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900066455
• CAZyme ID: MGYG000000043_00168
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
848	MGYG000000043_2|CGC1	98166.12	8.704

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000043	4183533	Isolate	United Kingdom	Europe

• Gene Location: Start: 34718; End: 37264 Strand: -

Full Sequence      

MKKHSLLIHGMAFILCLSILYGPDKIQAQKTSLVRVHENVRETPYPQKEHQVYINPTPLL
VPKSMKTEAVIQFELSNDSTFPAGKTMTDTPKPWLMFNPHRILEKGTWYWRVRSVTDKGE
KKAWSTVWKFQISGEEPQFVTPSFQAFFQNLPKGYPRLYCFLEKDLKTAPQRIASHPEYK
DMTSRAATAMKSNFDTDPNVYRYIRKYNPYVAWLQTAWLLTRDTQYAQKMVSYTRHLLRT
KPDKTLWKDDFYSGELIESLLYAYDSCHDMFTPQELRQMEQMIFEVAKGHHMVQRSGNEE
THIFNNHYWQHCFRQMLQIGLMFADRNETAREMLEYCYEVWTARAPASGFNRDGEWHNGT
GYFTANTHTLYYVPSLFSYLTGTDFLKHPWYQNAGKALLYTFPVGTMSAGFGDGNERQPV
PDRQRLAFADFLARETGNPYAAWYVNHCQRDLRRDFELRLYRMARSEKIYSDNKQLPEDR
GNALWLEDIGEVVAHSALQNTNRNLFLSFRSSPFGSGSHTLADQNSFNLHFRGVPVYRST
GYYLNFSDAHNLMSYRHTRAHNSILVDGIGQPFTTRAYGKITRMLNGETITYAVGDASNA
YCGVSEYPMWIENFKKAGITQTPENGFGETPLTKYRRHIFLLHPDIVLIYDELEASRPVR
WDWLLHSPVQFQIDGKNATLTTRYEQKQFSSVAQLFSNQPCEITQTDQFVCPPDPKKMKK
GQESKYVNQWHLTATFQPSAANRILTVIRILPDGQKMSELIRKGNTFTCGRWKIQAELDP
TQPASLQVVNTRNNATFSLGNDDVQIGGTTYKRLEKGSSVLYDKIDGEWLVHEMSDYEPQ
FTGAGPAK

Enzyme Prediction     

No EC number prediction in MGYG000000043_00168.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	497	653	7.5e-50	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	1.20e-86	37	446	4	446	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	5.13e-12	501	683	18	182	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49807.1	0.0	26	843	16	831
QUT44273.1	1.07e-301	59	843	1	783
QRQ48971.1	3.94e-289	33	843	15	824
QUT44689.1	1.59e-288	33	843	15	824
QIU94214.1	3.20e-276	38	844	46	847

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	1.47e-115	1	840	1	865	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	8.37e-113	1	840	1	865	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.25e-33	46	667	28	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.09e-32	46	667	28	661	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000581	0.997725	0.001163	0.000175	0.000167	0.000154

TMHMM  Annotations     

start	end
5	22