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CAZyme Information: MGYG000000043_01845

You are here: Home > Sequence: MGYG000000043_01845

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900066455
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900066455
CAZyme ID MGYG000000043_01845
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
486 MGYG000000043_17|CGC1 55704.33 6.2297
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000043 4183533 Isolate United Kingdom Europe
Gene Location Start: 59601;  End: 61061  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000043_01845.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 211 469 7.9e-40 0.7538461538461538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.01e-14 218 417 226 421
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 7.79e-04 240 467 199 412
polygalacturonase ADPG
PLN02793 PLN02793 8.90e-04 235 339 229 336
Probable polygalacturonase
PLN03010 PLN03010 0.001 223 395 143 305
polygalacturonase
pfam00295 Glyco_hydro_28 0.001 213 468 88 309
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT85436.1 1.65e-254 41 486 16 461
QJR54182.1 1.85e-254 41 486 19 464
QJR61020.1 1.85e-254 41 486 19 464
ALA72160.1 1.85e-254 41 486 19 464
AII66316.1 1.85e-254 41 486 19 464

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 6.12e-08 130 471 84 418
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.162514 0.788636 0.047605 0.000395 0.000352 0.000478

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000043_01845.