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CAZyme Information: MGYG000000043_03024

You are here: Home > Sequence: MGYG000000043_03024

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900066455
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900066455
CAZyme ID MGYG000000043_03024
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
784 MGYG000000043_47|CGC1 87401.49 5.3197
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000043 4183533 Isolate United Kingdom Europe
Gene Location Start: 15597;  End: 17951  Strand: +

Full Sequence      Download help

MKNISKFAVV  FMLCTGALLQ  TGCQQHTASP  AIPSDPQIEE  SIKQWLDKMT  LEEKIGQMCQ60
ITIDVVTDFG  ASQKNGFTLD  KAKLDTVIGK  YKVGSLLNVP  LSVAQTKEKW  AEAIRQIQEV120
SMKEIGIPCI  YGVDQIHGTT  YTLDGTMFPQ  GVNMAATFNR  DLVKRSAEIS  AYETKACNIP180
WNFAPVVDLG  RDPRWSRMWE  NFGEDCYVNA  EMGKATVEGF  QGNDPNHIGK  YNVAACMKHY240
MGYGVPVSGK  DRTPSSISRS  DMREKHFAPF  LAAVRDGALS  VMVNSSVDNG  MPFHANEEFL300
TQWLKKDLNW  DGLIVTDWAD  INNLCVRDHI  AATKKEAIKI  AINAGIDMSM  VPYELSFCDY360
LKELVEEGEV  PMSRIDDAVS  RVLRLKYRLG  LFEHPYWDVK  EYDKFGSKEF  AEVALQAAEE420
SEVLVKNEDS  LLPLAKGKRI  LLTGPNANSM  RCLNGGWSYS  WQGHRADECA  QAYNTIYESL480
CNKYGKENII  YEPGVTYAPY  KNDNWWEENT  PEIGKAVAAA  SRADVIVACV  GENSYCETPG540
NLTDLNLSSN  QQELVKALAK  TGKPIVLILN  QGRPRLIKDI  EPLAKAIVNV  MLPGNYGGDA600
LANLLAGDSN  FSGKMPFTYP  KHINALATYD  YKSCENIGQM  NGNYNYDSVM  DIQWPFGFGL660
SYTTYKYANL  KLDKTTFNAD  DELTFTVDVT  NTGKTAGKES  VLLFSKDLVA  SSTPDNIRLR720
NFDKITLQPG  ETKTVTLKLK  GSDMAFVGYD  GKWRLEEGAF  KFKCGDLWID  AKCSNTKIWE780
TPNK784

Enzyme Prediction      help

EC 3.2.1.21

CAZyme Signature Domains help

Created with Snap3978117156196235274313352392431470509548588627666705744122351GH3
Family Start End Evalue family coverage
GH3 122 351 2.9e-66 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap39781171561962352743133523924314705095485886276667057441765PRK1509849467BglX50385Glyco_hydro_3146767PLN03080423662Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 3.41e-152 1 765 1 751
beta-glucosidase BglX.
COG1472 BglX 5.09e-83 49 467 1 386
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 7.31e-76 50 385 1 316
Glycosyl hydrolase family 3 N terminal domain.
PLN03080 PLN03080 7.08e-54 146 767 112 771
Probable beta-xylosidase; Provisional
pfam01915 Glyco_hydro_3_C 1.91e-50 423 662 2 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap39781171561962352743133523924314705095485886276667057441784ADY36471.1|GH31784ADY35485.1|GH31784QRM99675.1|GH31784SCV07081.1|GH31784QRQ54588.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
ADY36471.1 0.0 1 784 1 782
ADY35485.1 0.0 1 784 1 782
QRM99675.1 0.0 1 784 1 781
SCV07081.1 0.0 1 784 1 781
QRQ54588.1 0.0 1 784 1 781

PDB Hits      download full data without filtering help

Created with Snap3978117156196235274313352392431470509548588627666705744267845JP0_A287725XXL_A287725XXN_A487655TF0_A397656R5I_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JP0_A 0.0 26 784 1 759
Bacteroidesovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
5XXL_A 8.47e-113 28 772 2 745
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 4.56e-112 28 772 2 745
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
5TF0_A 5.69e-110 48 765 19 737
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
6R5I_A 3.06e-99 39 765 4 719
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap39781171561962352743133523924314705095485886276667057441784sp|A7LXU3|BGH3B_BACO146766sp|Q23892|GLUA_DICDI33765sp|P33363|BGLX_ECOLI33765sp|Q56078|BGLX_SALTY72765sp|T2KMH0|PLH24_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7LXU3 0.0 1 784 1 781
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
Q23892 1.56e-152 46 766 84 813
Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
P33363 1.14e-109 33 765 28 751
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q56078 4.39e-109 33 765 28 751
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
T2KMH0 5.48e-104 72 765 19 707
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000039 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000043_03024.