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CAZyme Information: MGYG000000044_01276

You are here: Home > Sequence: MGYG000000044_01276

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides merdae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides merdae
CAZyme ID MGYG000000044_01276
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
372 MGYG000000044_2|CGC8 42998.78 6.492
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000044 4300426 Isolate United Kingdom Europe
Gene Location Start: 412224;  End: 413342  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000044_01276.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 60 368 8.2e-75 0.9578313253012049

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 1.16e-54 69 365 34 335
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 9.84e-49 48 363 27 347
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT50302.1 1.23e-184 134 372 1 239
QDW23918.1 2.14e-179 13 372 10 368
QPH40458.1 2.39e-178 23 372 19 367
BCA52191.1 1.95e-177 19 372 15 367
QUT73021.1 1.95e-177 19 372 15 367

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3K11_A 3.54e-39 69 364 87 405
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
1NC5_A 9.68e-34 63 363 40 358
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 4.15e-33 63 363 30 348
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
5NOA_A 2.72e-20 168 317 158 321
PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron]
4Q88_A 5.44e-18 168 317 141 304
ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 5.30e-33 63 363 40 358
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
T2KPL9 5.22e-16 129 330 129 339
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1
L7P9J4 2.53e-14 129 330 131 340
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1
P0A3U6 8.54e-14 179 363 6 222
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 8.54e-14 179 363 6 222
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000209 0.999213 0.000143 0.000146 0.000132 0.000127

TMHMM  Annotations      download full data without filtering help

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