CAZyme Information: MGYG000000044_02815

Basic Information

• Species: Parabacteroides merdae
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides merdae
• CAZyme ID: MGYG000000044_02815
• CAZy Family: GH163
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
732	MGYG000000044_7|CGC1	83125.65	6.4005

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000044	4300426	Isolate	United Kingdom	Europe

• Gene Location: Start: 58155; End: 60353 Strand: -

Full Sequence      

MKQLIQCMGMLMLLFGLSSRVSAQITLVKDGKATSRIVLVEKNEVNEQAATLLQDFVKRI
SQATLPIVADTKARSGDILIGGKQASAGEDGFLLKTTANEQLQISSGGDKGAIYGVVSLL
EQYMGVSYFAKEAYTLTPMQTITLPAIHREETPAFRYRQTYSYNNDDPVYKLWFRLEEPK
DMFIENMWVHTFNRILPSDRFGKEHPEYYSFINGEHRPGHNSQWCLTNPKVFDAAVRQLD
SIFKAHPDMKMISVSQNDGNNTNCSCPACKEVDEYEGSPSGNLIRFLNKLAERFPDKEFS
TLAYLYSMQPPKHVKPLPNVNIMLCDIDCKREVPLTDNASGRDFVKALEGWSKISDNIFV
WDYGINFDNIVSPFPNFHILQKNIQLFKKNHVTMHFSQVNGIRGGDFSEMRAYMIGKLMW
DPYQNADSLMRTFMNGYYGAAAPYLYQYQKIMQGALLAGGQPLWIYDSPISHKNGMLNPV
LLKTYNELFDQAEEAVAGDTVLLRRVQLSRLPLQYSELEIARTQVGTDKTKIRELLGLFD
RRTRQFGVTSLNERKNAPGEYCELYKKRFLPQNEQSKASGASLTWIIPPQERYKTLGETA
LTDELFGGTTYVESWVGWNGTDGAFILDLGEEKSFTRIEADFLHQLGGWVLLPHSVSYSI
SSDNTTYKPFGSFTFAEDRDLQVKFVEGKAESDSPVKARYIKVEVKGIGLCPDWHYGVGY
PAWFFMDEVSVY

Enzyme Prediction     

No EC number prediction in MGYG000000044_02815.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH163	196	448	4.4e-104	0.9880478087649402

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16126	DUF4838	1.53e-139	188	449	1	263	Domain of unknown function (DUF4838). This family consists of several uncharacterized proteins found in various Bacteroides and Chloroflexus species. The function of this family is unknown.
pfam00754	F5_F8_type_C	3.55e-06	614	724	25	125	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam03648	Glyco_hydro_67N	3.84e-05	35	119	22	120	Glycosyl hydrolase family 67 N-terminus. Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the N-terminal region of alpha-glucuronidase. The N-terminal domain forms a two-layer sandwich, each layer being formed by a beta sheet of five strands. A further two helices form part of the interface with the central, catalytic, module (pfam07488).

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QCY55671.1	0.0	1	732	1	732
QUT53540.1	0.0	1	732	1	732
ANU63563.1	0.0	24	731	22	731
ASB38357.1	0.0	24	731	22	731
QQR09102.1	0.0	24	731	22	731

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q63_A	1.43e-11	576	731	617	773	BT0459[Bacteroides thetaiotaomicron],6Q63_B BT0459 [Bacteroides thetaiotaomicron],6Q63_C BT0459 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000287	0.998940	0.000281	0.000161	0.000156	0.000142

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000044_02815.