CAZyme Information: MGYG000000044_03255

Basic Information

• Species: Parabacteroides merdae
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides merdae
• CAZyme ID: MGYG000000044_03255
• CAZy Family: GH95
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
761		85236.14	5.6015

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000044	4300426	Isolate	United Kingdom	Europe

• Gene Location: Start: 6976; End: 9261 Strand: -

Full Sequence      

MKKEFWLTCISVCLLAACCEKESLPVTPTSSDLQFGHLAKTWDEGIPLGNATVGTLVWQR
DSVLRFSLDRTDLWDLRPMDSIAGPNNRFAWVCEQVRKGDYLPVQKKFDHPYNALPAPSK
IPGAALEFPLKIGKVSSVHLFLNNALCEVLWENGTKLQTFVHASEPVGWFVFENLPDTVS
PEIIAPRYSNPDEVAGDNSHAGPALGRLGYKQGTIQKEAGTTTFHQEGWGGFSYDVVVRW
QQKGGTLSGVWSLTSSLAADRADQETAEAMERGVEADYRSHMDFWKGYWAQSSVSLPDTL
LQKQYDNEMYKFGSAAREDSYPISLQAVWTADNGMLPPWKGDYHHDLNTQLSYWPAYTGN
HLQEGMGYLNTLWEQRDVYKKYTREYFGTDGMNVPGVCTLTGEPMGGWVQYSMSPTVSAW
LGQHFYLHWKYSADRIFLKERAYPFLKDVATYLEQISTVDADGVRRLPLSSSPEIFDNSI
NAWFKDMTNYDLSLMHFAFNAASELASELGLADEAAHWKAIGAQLPDLNLDEDRALTFAK
GFPYDQSHRHFSHAMSIHPLGLVDWSQGEKSQEIIKATLKKLQDFGPDYWCGYSYSWFGN
MKARAFDGEGAADALRTFAECFCLPNTFHANGDQTKSGKSKFTYRPFTLEGNFAFAAGIQ
EMLLQSHTGVIRVFPAVPVAWQDVSFDKLRAMGAFLVSAEKVAGQVRQVRILPEQGGTLR
LAIPEGCKVASVTGNKGDKLEKEGVLILETEKDKTVTVQYN

Enzyme Prediction     

No EC number prediction in MGYG000000044_03255.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH95	31	725	5.5e-110	0.9806094182825484

CDD Domains     

MGYG000000044_03255 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT50203.1	0.0	1	761	1	761
QUU05974.1	0.0	14	751	13	746
CBW21484.1	0.0	14	751	13	746
QCT77448.1	0.0	14	751	13	746
CAH06598.1	0.0	14	751	13	746

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2RDY_A	4.24e-29	30	712	2	743	ChainA, BH0842 protein [Halalkalibacterium halodurans C-125],2RDY_B Chain B, BH0842 protein [Halalkalibacterium halodurans C-125]
7KMQ_A	5.41e-29	23	722	31	758	ChainA, Glyco_hyd_65N_2 domain-containing protein [Xanthomonas citri pv. citri str. 306],7KMQ_B Chain B, Glyco_hyd_65N_2 domain-containing protein [Xanthomonas citri pv. citri str. 306]
4UFC_A	5.37e-28	257	721	261	741	Crystalstructure of the GH95 enzyme BACOVA_03438 [Bacteroides ovatus],4UFC_B Crystal structure of the GH95 enzyme BACOVA_03438 [Bacteroides ovatus]
2EAB_A	8.67e-19	299	726	365	854	Crystalstructure of 1,2-a-L-fucosidase from Bifidobacterium bifidum (apo form) [Bifidobacterium bifidum],2EAB_B Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum (apo form) [Bifidobacterium bifidum],2EAC_A Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complex with deoxyfuconojirimycin [Bifidobacterium bifidum],2EAC_B Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complex with deoxyfuconojirimycin [Bifidobacterium bifidum]
2EAD_A	1.14e-18	299	726	365	854	ChainA, Alpha-fucosidase [Bifidobacterium bifidum],2EAD_B Chain B, Alpha-fucosidase [Bifidobacterium bifidum]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8L7W8	1.69e-31	299	715	388	806	Alpha-L-fucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=FUC95A PE=1 SV=1
Q5AU81	1.42e-21	239	723	278	798	Alpha-fucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=afcA PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000091	0.999927	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000044_03255.