CAZyme Information: MGYG000000044_03323

Basic Information

• Species: Parabacteroides merdae
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides merdae
• CAZyme ID: MGYG000000044_03323
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1037	MGYG000000044_9|CGC2	117912.75	5.5706

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000044	4300426	Isolate	United Kingdom	Europe

• Gene Location: Start: 90775; End: 93888 Strand: +

Full Sequence      

MNTQRIIKNFIYTVAGGILSLGTTGCSGNKAETTDSFSTLEAQFSNPSSEYRTAPFMVWN
GKVTEIEIDRMLKDFKDAGCGGAFIHPRPGMITEYMSDEWYSLYRYAVDKGKEMGLDIWI
YDENSYPSGFAGGHVPEDMPESYNQGQGLELTKTDLLPDKTDEYFIILKKEGDKWTDITN
ALSQHKKAKGEYYLYKKTYLGKSDWYGGYSYVDLLVPGVTEKFIDLTMKGYEKTIKDEFG
KSVFGIFTDEPNISSPGGLRWTPDLFEVFRKQWGYDLKPLLPLLDEETGNWKQVRHNYME
TLLQMFVDRWSKPWHHYCETNNLKWTGHYWEHGWPQMNDGPDNMAMYAWHQVPAIDMLFN
QFDETNPQAQFGNIRAVKELRSAANQTGCNRTLSETYGGGGWDETFKDFKRLGDWEYALG
VNFMNQHLAHMTLTGARKYDYPPVFTYHSPWWPDYRELNDYYGRLSFVMSKGIQKNDILV
LEPNSTLWSYYVHAGSSPKLMEIGTNFQAFVTTLEKNQVEYDLGSENIIKDLGKVENGRF
IVGNASYSTVVLPPMMETLNKPTFNLLQQFVEQGGQIITFSAPTRIDGAVNDELAGLLTG
TTVTSLPELSKDVIARYFSSDNFRITFNSGNLYHHRRRFADGELVFLVNSSMDEVVDGTL
STQGKAMLEMDALNGEIYTYPSSKEKGILSTSFRIEPAGSLLLYCSDKNPKNYPERPGKA
GSSPVTATSRTTVSRLRDNALTIDFCDVTVKGKTYKKQHFSRAADIAFKAHGFTNGNPWN
TSVQYKRNILDRDHFKDGGFTASYHFTVNDAFDYSGIKLVSERPELFTVKINGNLVNALP
GEWWLDRSFGVYPIGGQVKKGSNTVELSINPMRIFAEIEPVYIIGNFSVVPEQEGWSIGA
PQESFTLGSWKEQKQPFYSWDMSYSKEYTLDDLTGRYAVKLNKWNGTVAEVYVNGQKAGM
IAFDPWQLDVTSYLKEGSNTIDVHVIGSLKNLLGPHYRNPAPGLASPWHWKNVDKPISGK
EYQMMDYGLMEDFELIH

Enzyme Prediction     

No EC number prediction in MGYG000000044_03323.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	40	715	2e-78	0.7888349514563107

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	1.44e-09	212	651	401	839	alpha-L-rhamnosidase.
pfam08531	Bac_rhamnosid_N	0.002	950	985	17	63	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT50138.1	0.0	1	1037	1	1037
QKH96611.1	0.0	1	1037	1	1037
SCM58509.1	0.0	1	1036	1	1029
BBD46126.1	0.0	37	1037	32	1035
QGT72310.1	0.0	37	1036	36	1034

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	1.05e-09	40	578	30	601	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000003	1.000044	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000044_03323.